Gene Rcas_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1798 
Symbol 
ID5539276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2309901 
End bp2310554 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID640893937 
ProductO-methyltransferase family protein 
Protein accessionYP_001431908 
Protein GI156741779 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.420384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATG ATATCACAAA CATCGCAATC GAGGATTATC TGGCTGAACT GATGCCGCCG 
CGGCCGCAGG CGCTGGCGGA ATTGGAGCGT CAGGCGCGTG AGCATGGCTG GCCCCTGGTG
GGACCGGTGG AAGGGCAGTT GCTCTACCTG CTGGCGAAGA TGCATGGCGC GCGCGAAGCA
CTGGAGATCG GTGTAGCCAC CGGGTACGCC GCCATCTGGC TGCTGCGGGC AATCGCGCCG
AACGGCGGTC GCCTGACGGC GATTGAGCGC AACCCGGAGC GCATCGCGCT GGCGCGCACC
TATGTGGCGC ACGCAGGCTA CAGCGATCAT TTCAATATTA TCGAAGGGGA ATGGTTCACC
ACCCTTGAGC GGATGGAAGG TCCTTACGAC CTTGTCTTTC TCGACATTCT CCGCCATCTG
ACGGGCGAAC GCGAGTCGTT GCGCGCGCTC GATCTCTGCG TTTCCCGCCT GCGCCCCGGT
GGTCTGTTGA TCGCCGATAA CGCATTGTGC AATGCGCTGG TGCTGGAAGA TGACGCAGCG
CCGATTGTGC GTGGCATTCA GGAGTTCAAC CGTGCAATCA TGACTCACCC ACAACTCGAG
TCGGTTATTG TACCGGTGCG CGACGGCGTG GGCATATGCC GCAAGCGCGA TTGA
 
Protein sequence
MRDDITNIAI EDYLAELMPP RPQALAELER QAREHGWPLV GPVEGQLLYL LAKMHGAREA 
LEIGVATGYA AIWLLRAIAP NGGRLTAIER NPERIALART YVAHAGYSDH FNIIEGEWFT
TLERMEGPYD LVFLDILRHL TGERESLRAL DLCVSRLRPG GLLIADNALC NALVLEDDAA
PIVRGIQEFN RAIMTHPQLE SVIVPVRDGV GICRKRD