Gene Rcas_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1790 
Symbol 
ID5539268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2296728 
End bp2296940 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content54% 
IMG OID640893929 
Producthypothetical protein 
Protein accessionYP_001431900 
Protein GI156741771 
COG category[S] Function unknown 
COG ID[COG3360] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA GCGTGTACAA GATCATCGAA CTGGTCGGCA CAAGCGCCGA GTCGTGGGAA 
AAAGCTGCGG TAAACGCCAT CGAGACCGCA TCGCGCCACC TGAAGGATCT GCGGGTCGGC
GAGGTGGCTG AGATGGACAT TCACCTGGAA GACGGTAAGA TCATGTATCG CACGAAACTG
AAGGTGTCGT TCAAGTACCA CGAAGATATT TGA
 
Protein sequence
MSESVYKIIE LVGTSAESWE KAAVNAIETA SRHLKDLRVG EVAEMDIHLE DGKIMYRTKL 
KVSFKYHEDI