| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1786 |
|---|
| Symbol | |
|---|
| ID | 5539264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2292507 |
|---|
| End bp | 2293673 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640893925 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001431896 |
|---|
| Protein GI | 156741767 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACT TTTTCGAGTA CCACATGCGC ACCCGATTGA TGTACAAGAT CGGCCTGGCG
CGTGAATTTG CCAATGAAGT CGCGCAACTT GGCGTGCAAC GCGCGCTGCT CGTCGCGGAT
CCCGGCGTGG TGCAGGCAGG ATTGCTCGAC CGGGTGCGTG GAGGTTTGGA AGGATCTATC
GATGTCGTGG GCGCCTTTAC CGATGTTCCG TCCGACTCAT CAGTGGCGAC GGTCGAGCAG
GGCGCCGCTG TGGCGCGCGA TACCGGCGCT GATGTGTTGA TTGCAGTCGG CGGTGGTTCT
GCCATTGATA CCGCCAAGGC CATGCGCATC CTGCTGACCG AAGGCGGGAC GCTGTACGAC
TATCAGGGCG CCAATCTCCT CACCCGCCCG CTCTTCCCGA TGATTGCCAT CCCGACAACC
GCCGGCACCG GCAGCGAAGT CACCCCGGTT GCGGTTATTC GTGATGAGCA GGCGGAACAG
AAACTGTTCT TCCTCAGTCC CTATCTGGGA CCGGAACTGG CGATCCTCGA CCCGGAGATG
ACGCGCACGC TGCCGCCGCG TCTGACGGCC GCTACCGGTA TGGACGCGCT CAGCCACGCC
ATCGAGACTT TCGTTGGCGT TGGCGCGAAT CCGATCACCG ACAGCCTGGC GCTTCAGGCG
ATTGACATGA TCTCGAACTA TCTGCGTGCC GCCACGCACA ATGGCGATGA TCTCGAAGCG
CGCGGCAATA TGCTGATCGC GGCTGCCATT GCGGGGATTG CGTTTTCCAC CACGGGCATC
GGTGTGAATA CCGGCATCAT CCATGCCGCC TCGCACACCG TCGGTGCGGC GTATCACGTT
CATCACGGCA CGGCTAATTC GATCCTCCTG CCGCACGGCA TGCGCTTCAA CGCTGCGGTC
GTTCCCAACC GTATGGTTCG GATCGCGCGC GCTATGGGCG TTAACGCCGG TGGACGCCCC
GAAGAGGATG TCATTGCCGA CGGGATCGCC GCTGTCGCCA AACTCGCCGC CGATTGCGGG
TTGCCTGCGC GCCTGCGTGA TGTCGGTGTG CCGGAGGATG CCTTGCCTGC GCTCGCCGAA
GGGACCTTGA TGGATGGCGC GATTATGAGC AATCCACGCC CGGTGGAGTA TGAAGATGCG
CTGGCGATCC TGCGCGCTGC CTACTGA
|
|---|
| Protein sequence | MIDFFEYHMR TRLMYKIGLA REFANEVAQL GVQRALLVAD PGVVQAGLLD RVRGGLEGSI
DVVGAFTDVP SDSSVATVEQ GAAVARDTGA DVLIAVGGGS AIDTAKAMRI LLTEGGTLYD
YQGANLLTRP LFPMIAIPTT AGTGSEVTPV AVIRDEQAEQ KLFFLSPYLG PELAILDPEM
TRTLPPRLTA ATGMDALSHA IETFVGVGAN PITDSLALQA IDMISNYLRA ATHNGDDLEA
RGNMLIAAAI AGIAFSTTGI GVNTGIIHAA SHTVGAAYHV HHGTANSILL PHGMRFNAAV
VPNRMVRIAR AMGVNAGGRP EEDVIADGIA AVAKLAADCG LPARLRDVGV PEDALPALAE
GTLMDGAIMS NPRPVEYEDA LAILRAAY
|
|---|
| |