| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1779 |
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| Symbol | |
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| ID | 5539257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2284958 |
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| End bp | 2285893 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893918 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001431889 |
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| Protein GI | 156741760 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.255898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCGAC ACAACGATGT GGAGCTGGCC CTGTGGAGCT ACGGGGCAGT TGAGGTGGCA
TGGCTGGAAC AGGCTATGCA CTTGGCGCCT GCGTCGCCGT CCGCAATGCG CGTTGCGGCA
CTGTTTGCTC AGGGAGGGGT GGTACGCATC AGGGGCGCAG CGGTGGAACG CATCAACGGT
TCTGATCCCC TGGCGGGGAC GAAGACATAC CAGGGGAGCA CAGCCTCTGA CCGAGATCGC
AGAGGAATCG CTGCGCCTTG TTACGATGGT CTCGAACTCG AACCAGGCGC CGGATGGTTG
TGGAGCGGGC GCGCGCCGCT GACGATTATG CCGCACCCTC CCGGAGGCGC GCTGCTGGCA
GTGCTTCCGG CCACGACACT AATGGCGCGG CTTGGCAACG TGGATGCGCT GACGGGGAGG
ATTCTGTCGG TTGTGCAGGG ATGCGGCGCT GTCTGCGTTC AGTTGCTGTC AGCCCTTGTT
CTGCAGGCGC CACTGCTCAG CGCCGGACAG CGCCTGATCC TGGGAGACGG CGCTCTCGAT
GCAATCATCG TATGGCTGCG CGGTGAGCAG ACCACAGACG ATCACCTGTC AACACGCCGC
CGTGAGTTGC TCAACGCAAT CTACTCCTAC ATTGATCATC GTCTTGAGGA TTATCAACTG
TGCCCGCGCG TTATTGCCGA CCGATTCGGT GTCTCCGTTC GCTATCTGCA CATGCTCTTC
GCGGCGACCG GTATCACCGT CACCCGCTGG ATCACCATTC GCCGTCTGGA GGTCATTCGG
AGCGAATTGC TCCGTTGCGG CGGCGACCAC GGCAGCATCC GCGACATTGC CACACGTTGG
GGCTTTCACG ATCTGTCGCG CTTCAGTCGC GTCTTCCGGC AGCACTTTGG CGAGCCGCCG
TCGGTTTATG TACGTCGGCG TGTGGGGATA AGGTGA
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| Protein sequence | MERHNDVELA LWSYGAVEVA WLEQAMHLAP ASPSAMRVAA LFAQGGVVRI RGAAVERING
SDPLAGTKTY QGSTASDRDR RGIAAPCYDG LELEPGAGWL WSGRAPLTIM PHPPGGALLA
VLPATTLMAR LGNVDALTGR ILSVVQGCGA VCVQLLSALV LQAPLLSAGQ RLILGDGALD
AIIVWLRGEQ TTDDHLSTRR RELLNAIYSY IDHRLEDYQL CPRVIADRFG VSVRYLHMLF
AATGITVTRW ITIRRLEVIR SELLRCGGDH GSIRDIATRW GFHDLSRFSR VFRQHFGEPP
SVYVRRRVGI R
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