Gene Rcas_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1774 
Symbol 
ID5539252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2277332 
End bp2277763 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID640893913 
Productmonovalent cation/proton antiporter, MnhG/PhaG subunit 
Protein accessionYP_001431884 
Protein GI156741755 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit 
TIGRFAM ID[TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC TGATTCAAGA GATCGTCAGC GCTGTGCTTC TCGTGATCGG AACGCTCCTG 
CTGCTGCTGG CGGGCATTGG TATCGTGCGC ATGCCCGATA TTTTCCTGCG TATGTCGGCG
GCGTCGAAGG CGTCGTCGCT TGGCGCCGGA TGCGTGTTGC TGGCGGTCGC GGTGTCGGCG
GCTGATATTG CGATCACGGT GCGCGCGGTC GCGGGGGTGC TCTTCCTGTT CCTCACTGCG
CCGGTGGCCT CGCACATGAT TGGGCGCGCA GCGTATATGA TCGGCGTTCC GCTCTGGAAA
GGGACGCTCG TCGATGAACT CAAAGGGCAC TATGATACGC GCCGCCACAC GCTGCGCGGT
GTCGATGACG CCTCTCCGCG TCCGCAACGC GGCACTGGCC CGTTGGGGGA TGTGCGGGAC
GCGGGCAGGT GA
 
Protein sequence
MIGLIQEIVS AVLLVIGTLL LLLAGIGIVR MPDIFLRMSA ASKASSLGAG CVLLAVAVSA 
ADIAITVRAV AGVLFLFLTA PVASHMIGRA AYMIGVPLWK GTLVDELKGH YDTRRHTLRG
VDDASPRPQR GTGPLGDVRD AGR