| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1771 |
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| Symbol | |
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| ID | 5539249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2275090 |
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| End bp | 2276592 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893910 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001431881 |
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| Protein GI | 156741752 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATGG ATGTTCTGTT AGTGCTGCCG GTGCTTATTC CGTTCATCAC CGGTATTGTC
ATGCTCGTAT TCTGGGGGCG ACGCGACATT CACCGCGCCT TGAACGTCGT TGGCGCGGCG
CTGCTGCTGG TTGCCGGCAT TGCGTTGTTG GATGGTGTGT CGCGCAATGG CATTCAGGCG
ACGCAGTTGG GCAACTGGCC CGCGCCGTTC GGTATTTCGT TCGTCGCCGA TCTTCTCAGC
GCCATCATGG TGGTCATCAC CGGATTGACG GCGCTTGCAG TCGCTGTGTA TTCATTGGGC
AGCATGGATG AAGCGCGCGA GCGGTTTGGC TACTATCCGT TGTTGCACAT CATGTTCATG
GGCATCTGTG GCGCGTTCCT GACGGGTGAT ATTTTCAATC TGTATGTCTG GTTCGAAGTG
CTGCTGATGT CGTCGTTCGT GCTGATGGCG CTGGGGGGCG AACGGGCGCA ACTTGAGGGG
TCGATCAAGT ATGTGACGCT CAACCTGCTC TCTTCAGCAC TCTTCCTCAG CGCCGTCGGA
ATCCTGTATG GCGCGGTTGG CACGCTCAAT ATGGCCGACC TGTCGCAGCA GTTGTCGCTT
CTCAATCAGC CTGGGCTGGT GACGACGCTG GCGATGCTGT TTCTGACGGC GTTCGGCATC
AAAGCCGCGA TCTTTCCGCT TTTTGCCTGG CTGCCGGCAT CGTATCACAC GCCACCCATT
GCGGTTTCGG CGATCTTCGC CGGTCTGTTG ACCAAGGTTG GCGTCTATGC ATTGATCCGG
GTATTCTCGC TGTTGTTTGT GCAGAACATT GCGCTCACCC ACGGATTGAT CCTGGCGCTG
GCGGGTTTGA CGATGGTGAC CGGGGTGCTT GGCGCGGTGG CGCAAAATGA GTTCCGCAGG
GTGTTGTCGT TCCATATCAT CAGCCAGATC GGCTACATGA TCATGGGGTT GGGGCTGTTC
ACGTCGCTGG CGCTGGCGGG AGCAGTTTTT TACATCATGC ACCATATTAT TGTGAAGATG
AACCTGTTTC TGGTGAGCGG CGTCGTTCAT CGCCTGCGCG GGTCGTATGA ACTGAAAGAC
CTTGGTGATG TCTACAAGGT GTATCCCTGG CTGGCGATCC TGTTCCTGAT CCCGGCGTTT
TCGCTGGCAG GCTTTCCGCC ACTCTCTGGA TTCTGGGCGA AATTGATGCT GGTGCAGGCT
GGATTGCAGG TCGAACAGTA TGTCATTGTT GCCGTATCGC TCGTCGTCAG TTTGTTGACG
GTCTTCTCGA TGACCAAAAT TTGGGCGGAG GCGTTCTGGA AGAAAGCGCC GGCGCCGACC
CAATCGAATA CGCAGAGTCT GGCATTCATG GTCGTTCCGG TCGTCGGGTT GGCGCTGGTG
ACCGTCGTGA TTGGGTTATC GGTGCAACCG TTCTACGATC TGGCGCAGCG CGCCGCCGAT
CAACTGCTCA ACCCGGCGGA GTACATTGCA GCGGTGCAGA GTGCGTCGCT GGCGCTCCGG
TGA
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| Protein sequence | MGMDVLLVLP VLIPFITGIV MLVFWGRRDI HRALNVVGAA LLLVAGIALL DGVSRNGIQA
TQLGNWPAPF GISFVADLLS AIMVVITGLT ALAVAVYSLG SMDEARERFG YYPLLHIMFM
GICGAFLTGD IFNLYVWFEV LLMSSFVLMA LGGERAQLEG SIKYVTLNLL SSALFLSAVG
ILYGAVGTLN MADLSQQLSL LNQPGLVTTL AMLFLTAFGI KAAIFPLFAW LPASYHTPPI
AVSAIFAGLL TKVGVYALIR VFSLLFVQNI ALTHGLILAL AGLTMVTGVL GAVAQNEFRR
VLSFHIISQI GYMIMGLGLF TSLALAGAVF YIMHHIIVKM NLFLVSGVVH RLRGSYELKD
LGDVYKVYPW LAILFLIPAF SLAGFPPLSG FWAKLMLVQA GLQVEQYVIV AVSLVVSLLT
VFSMTKIWAE AFWKKAPAPT QSNTQSLAFM VVPVVGLALV TVVIGLSVQP FYDLAQRAAD
QLLNPAEYIA AVQSASLALR
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