Gene Rcas_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1769 
Symbol 
ID5539247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2274284 
End bp2274700 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content58% 
IMG OID640893908 
Productputative monovalent cation/H+ antiporter subunit B 
Protein accessionYP_001431879 
Protein GI156741750 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCAT TAATTCTGGC GACCGCAACC CGCCTGTTGT TGCCGTTGAT GCTCATTTTC 
TCAATCTTTC TGCTCATTCG GGGCCACAAT GAGCCGGGTG GCGGATTCGT CGGCGGGTTG
GTTGCAGGCG CAGGTTTCAC GTTGTACGCG GCGGTGTATG GCGTTGCGCA GGCGCAGAAC
ACGCTACGGA TCGACCCCAA GCGCTTGATC GGTGCGGGGT TGCTGGTGGC GGCGTTGAGT
GCGCTGTTCT CGCTGTTTCT AGGGCTGCCA TTCATGACCG GGCTCTGGTA CAAAGAAGCG
TTGCCGGTCA TCGGTAAAGT CGGCACCCCG TTGCTGTTCG ATGTTGGCGT GTACCTGGTA
GTGGTTGGTA TTACCGTCAC GATCATGTTT ACGCTCTTCG AGGTGGAGGG GGAGTAG
 
Protein sequence
MHSLILATAT RLLLPLMLIF SIFLLIRGHN EPGGGFVGGL VAGAGFTLYA AVYGVAQAQN 
TLRIDPKRLI GAGLLVAALS ALFSLFLGLP FMTGLWYKEA LPVIGKVGTP LLFDVGVYLV
VVGITVTIMF TLFEVEGE