| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1766 |
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| Symbol | |
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| ID | 5539244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2269672 |
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| End bp | 2270784 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893905 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001431876 |
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| Protein GI | 156741747 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.174884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCC GCCTCTGGCC CGTGATGCGC AAAGAGTTCA TCCACATTCG GCGCGATCCG
CGCACGCTGG TGGTGATGTT CATCGCGCCG CTGATGCAGT TGATCCTGCT CGGCTATGCT
GCAACCACCG ACGTGCGCGA CGTGCCGCTG GCAGTGTTCG ACCAGGATCG CACCTCTGCC
AGCCGTGATC TGGTTGAGGC ATTTGTCGCC TCCGGGCAGT TTGCTGTGGC ACACTACACC
GGCAGCGACC GCGAACTCGC CGCGTTGATC GATGGCGGCC GGGCGCGCGC CGGTCTGATC
ATTCCGCCAG GGTATGCTGC CGACGTGCAG GGACGCCGGG GGGCGCAGGT GGTGTTCGTT
CTCGATGGAT CGGACCCATC GATCGCCGGT TCGTCACTAT CGGCGGCGCG TCTGATCGGG
CAGGCGAAGT CGGTCAGCAT CCAGACCGAG CGACGTGGCG CAACCGCGCC GCTGCTCGAG
GTGCGCACCC GCGTCTGGTA CAACCCGGAT ATGGCAAGCG CCGTCTTTAT GATTCCCGGT
CTCATTGGGC TGGTGCTCCA ATTGCAGGCG ACGCTGCTCA CATCGTCGGC AATTGTGCGG
GAACGCGAAC GGGGAACGAT CGAGCAGTTG ATCATCACCC CCATCAGGTC CTTTGAGCTG
ATTCTGGGCA AGATTCTGCC GTATGCGCTG GTGGCGCTGC TGATCACGCT CGAAGTGTTG
ATCCTGGGAA CCTTCTGGTT TGGCGTGCCG ATCAAGGGCG ATGTCGGGTT GCTGCTGGCG
ATCTCCTGTC TGTTCCTGCT TTCGACGCTG TCGATTGGAT TGCTGATTTC GACCGTAGCG
AACACGCAGC AGGAAGCGTT TCTGCTGACC TTCCTGACCC TTCTGCCATC GGTCTTTCTT
TCCGGTTTCA TCTATCCGGT AGCTGCGATG CCTGCGGCGT TGCAATTCAT CAGCGGCATC
ATTCCGCTGA CCTACTATCT GATTGTGGTG CGTGGCATCG TCATCAAAGG CGTCGATGCT
TCGACGTTGC TGCCGCAGAT CGGCGCACTG GCACTGTTTG GCGCCATCCT GATCGTTGCC
GCCACGGCGC GCTTCCGCAA ACGGCTTGAC TGA
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| Protein sequence | MFSRLWPVMR KEFIHIRRDP RTLVVMFIAP LMQLILLGYA ATTDVRDVPL AVFDQDRTSA
SRDLVEAFVA SGQFAVAHYT GSDRELAALI DGGRARAGLI IPPGYAADVQ GRRGAQVVFV
LDGSDPSIAG SSLSAARLIG QAKSVSIQTE RRGATAPLLE VRTRVWYNPD MASAVFMIPG
LIGLVLQLQA TLLTSSAIVR ERERGTIEQL IITPIRSFEL ILGKILPYAL VALLITLEVL
ILGTFWFGVP IKGDVGLLLA ISCLFLLSTL SIGLLISTVA NTQQEAFLLT FLTLLPSVFL
SGFIYPVAAM PAALQFISGI IPLTYYLIVV RGIVIKGVDA STLLPQIGAL ALFGAILIVA
ATARFRKRLD
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