| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1763 |
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| Symbol | |
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| ID | 5539241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2266316 |
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| End bp | 2267251 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893902 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431873 |
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| Protein GI | 156741744 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.612212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT TGCCCGCCAT CGAAACCATT GACCTGAGCC GCTCGTTCGG TCCGGTGCAT
GCGGTCTATC GCCTGAACCT GATGGTGGCA GCGGGGCGGA TCCACGGTTT GCTCGGACCG
GATGGCGCCG GCAAGACGAC CACCCTGCGC CTGCTCTGCG GTGCATTGCG CCCCGACAGC
GGACGCGCAA TCGTCGCCGG GATCGATGTG GCGCGCGATC CAGAGGGCGT GCGGCAACGC
ATCGGCTACA TGCCGCAACG CTTTAGTCTG TACGGCGACC TGACCGTGCT CGAAAATCTG
CGCTTTTACG CCGACGCCTA TAGCGTCCCA CACGCGGAAC GCGCCACGTT GCTGAACCGA
CTGCTCGGAT TCAGCCGCCT GGAGCCGTTT CGCAACCGAC GCGCCGATGA ACTCTCCGGC
GGAATGCGCC AGAAACTGGC GCTGGCATGC GCGCTCATCC ATCATCCACA GATACTGCTG
CTCGACGAAC CCACCACCGG CGTCGATCCG GTATCGCGGC GTGAATTCTG GGATCTTCTC
CACGAAGCGG TTCACGACCG CGGCATGACG GTGTTGCTCA CCACGCCATA TATGGATGAA
GCCGAGCGCT GCCACGAGGT GAGTTTCATG CGCGCCGGCG ATCTGCTGGC GCACGGGACG
CCGCGCGAAC TCCAGCGCCT CGTGCCCGGC GCCGTGCTGG AGATCCGCGC CGAGCCGCGC
CACGCAGCAG AAACCGTCAT CCGGGCGCTT CCCGAAGTGC GCGATGTTCA CGTCTTCGGT
GATCGTCTTC ACGTGATTGC CGCACCAGGG TTCGATGACG CAATGCTGCA CCAGACCCTC
ACAGACGCAG GCGTGACGCT GCACGCCATT CGCCCGGTAT CACCCGGCAT GGAGGATATC
TTCCTGTATC TGCAACGAGA GAGGAGATCG CAATGA
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| Protein sequence | MNDLPAIETI DLSRSFGPVH AVYRLNLMVA AGRIHGLLGP DGAGKTTTLR LLCGALRPDS
GRAIVAGIDV ARDPEGVRQR IGYMPQRFSL YGDLTVLENL RFYADAYSVP HAERATLLNR
LLGFSRLEPF RNRRADELSG GMRQKLALAC ALIHHPQILL LDEPTTGVDP VSRREFWDLL
HEAVHDRGMT VLLTTPYMDE AERCHEVSFM RAGDLLAHGT PRELQRLVPG AVLEIRAEPR
HAAETVIRAL PEVRDVHVFG DRLHVIAAPG FDDAMLHQTL TDAGVTLHAI RPVSPGMEDI
FLYLQRERRS Q
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