Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1761 |
Symbol | |
ID | 5539239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2264244 |
End bp | 2265212 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893900 |
Product | ABC transporter related |
Protein accession | YP_001431871 |
Protein GI | 156741742 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.726529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT ACGCTGTCAT AACCGATCAT CTGACGCGCC GTTTCGGTTC GTTCGTAGCG GTGCATGAAG TCTCGTTGCA CGTATCCTAT GGCGAAGTCT TCGGTTTTCT GGGACCGAAC GGCTCCGGCA AAACCACCAC GATCCGCATG CTCTGCGGGC TGCTGACACC GAGCAGCGGC AGGGGGCGCG TTCTAGGACT CGACATTGCG CGCGACCAGG AAGCCATTCG CCGACGGATC GGCTACATGT CGCAAAAGTT TAGTCTCTAC GGCGATCTGA CGGCGCGTGA AAACCTGACA TTCTATGCCG ACGTGTACGG TCTTCCGCGT GCCGAACGCG CCACACGCAT CGACGCATTG ATCGACCTTG CCGGACTGCG CGGGCACGAC CGGGTGCTGA CCGCAGACCT GCCGGGCGGC TGGCGGCAAC GCCTGGCGCT GGCATGCGCC ATCGTTCATC GTCCGCAGGT CCTCTTTCTG GACGAGCCGA CGAGCGGCGT CGACCCGGAG GCGCGCCGCG AGTTCTGGGA CCTGATCTAC GACCTGGCAG GCGAAGGGGT GACTGTCTTT GTCACCACTC ACTTCATGGA CGAAGCCGAG CACTGCAACC GCATTGGACT GATGTACGGC GGCAGACTGG TCGCCCTCGA CGCACCAATG GCGCTCAAGC GCACGACGTT CGACGGCGCC GTACTGGAAG TTGAGGGCAC GCCGCAGGAA CGAGCGCGCA CCACCCTGCT GGCGCAACCC GGCGTGCGCA GCGTGGCCCC GCATGGCGCC CGGCTCCACG TCATCGTCGA CGACGCAGCG CTTCGGTTGC CGCATCTTGC CGCAGCCCTG GAGTCGGCGC AGGTGTCCGA CGTTCACATC GAACCAATTG ATCCGTCGCT CGAAGATGTG TTTGTGGCGA TTGTAGATCG GTATCTGGGG AAGCAGCCAG ATTCTCCAGA CGAGTCAGCC ACTCGTTGA
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Protein sequence | MTDYAVITDH LTRRFGSFVA VHEVSLHVSY GEVFGFLGPN GSGKTTTIRM LCGLLTPSSG RGRVLGLDIA RDQEAIRRRI GYMSQKFSLY GDLTARENLT FYADVYGLPR AERATRIDAL IDLAGLRGHD RVLTADLPGG WRQRLALACA IVHRPQVLFL DEPTSGVDPE ARREFWDLIY DLAGEGVTVF VTTHFMDEAE HCNRIGLMYG GRLVALDAPM ALKRTTFDGA VLEVEGTPQE RARTTLLAQP GVRSVAPHGA RLHVIVDDAA LRLPHLAAAL ESAQVSDVHI EPIDPSLEDV FVAIVDRYLG KQPDSPDESA TR
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