Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1750 |
Symbol | |
ID | 5539228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2253487 |
End bp | 2254743 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893889 |
Product | 2-alkenal reductase |
Protein accession | YP_001431860 |
Protein GI | 156741731 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.137948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.435495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCTT CTTTGATATT CGCCGCACTC GTGACGATGC TTGTGCTCCC CATGGGATGC ACCCTGCCAT CGGTCGATCT GCCGCGTCCT GTGGCAACAG AACAAACTAC CGCTCCGACC GCAGCAGTTC AGGCAGAGGC GACCCGCGCA CCGATCACGC CGTCAGCGCC AACGACCACC CCTGCGCCAT TGCCTGCGCA GGCGCCGCTG CCGACCCTTC CACCAGAACT GACCAACCCG CTGGAAGCCG AGCAGGCAGC ACTGACCGCC CTCTACCGGC AGGTGAATCC GGCGGTTGTC AGCATTGAAG TGGTTGCCGA TCATCCGCCG GTTGGCGGAG CGCCGTTCAC CGTTCCCACC AGTCAGGGTT CTGGCTTTCT GTTCGATGAT CAGGGGCATA TTGTCACCAA TAACCACGTG GTCGAAAACG GCGCGAAGTT CCAGGTGCGC TTCTCCGACG GCACGGTGGT GATGGCGCGG TTGGTCGGCA GCGATCCGGG AAGCGATCTT GCGGTGCTGA AAGTCGATGC CTTGCCGCCG GGAGCAGCGC CGTTGCCCCT CGCCGACTCG CGAACCGTCG AGGTCGGTCA GCGCGCGATT GCAATCGGCA ATCCGTTTGG GTTGCGCAAC ACCCTCACGG TGGGAGTCGT TAGCGGCATT GGGCGCAGCC TCAGCGGGCC CGCGAGCAAC AGCGGCGGGC GCTTCCGCAT CCCGAATATC ATTCAGACGG ACGCGGCGAT CAATCCGGGG AATTCCGGCG GTCCGCTGCT CAATATCTAC GGCGAAGTGA TCGGTGTCAA TACGGCTATC AGCAGCGGTT CCGGCGCCTT CGAGGGGGTC GGGTATGCAG TGCCGTCCAA CGCGGTCAGC CGGGTGGTTC CGGCGCTCAT CCGCGATGGT CGCTACGATC ACCCGTGGAT GGGCATCGGA ATGCGCGATG TCGATCCGTT GCTGGCGGAT AGCCTGAACC TGCCGGCGCG TCAGGGTGTG CTGATCACCG AGGTTGTGCC CGATAGCCCT GCCGCCCGCG CAGGGCTGCG CAGCGGAACG CAGATCGTTT CGGTTGGCGG GCGCGAATTG CGCATCGGTG GCGACATTAT TATTGCGATT AATGGCCAAC CGGTGCGTGA CAGCGATGAA CTCGTCAGTT ATCTCGAACT TGAAACGTCC GTCGGCGATA CTGTGATGAT GACCGTCCAA CGTGGCGATC GCCAGGAGCA GATTACGATG ACACTCGGCG CACGCCCGCG TGAGTGA
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Protein sequence | MRASLIFAAL VTMLVLPMGC TLPSVDLPRP VATEQTTAPT AAVQAEATRA PITPSAPTTT PAPLPAQAPL PTLPPELTNP LEAEQAALTA LYRQVNPAVV SIEVVADHPP VGGAPFTVPT SQGSGFLFDD QGHIVTNNHV VENGAKFQVR FSDGTVVMAR LVGSDPGSDL AVLKVDALPP GAAPLPLADS RTVEVGQRAI AIGNPFGLRN TLTVGVVSGI GRSLSGPASN SGGRFRIPNI IQTDAAINPG NSGGPLLNIY GEVIGVNTAI SSGSGAFEGV GYAVPSNAVS RVVPALIRDG RYDHPWMGIG MRDVDPLLAD SLNLPARQGV LITEVVPDSP AARAGLRSGT QIVSVGGREL RIGGDIIIAI NGQPVRDSDE LVSYLELETS VGDTVMMTVQ RGDRQEQITM TLGARPRE
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