Gene Rcas_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1743 
Symbol 
ID5539221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2245385 
End bp2245777 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content58% 
IMG OID640893882 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001431853 
Protein GI156741724 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.313335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAG CATCATTTGA ACAATTCGTG ACCTTCATCT ACGTCCGCGA TCTGAACGCC 
AGCGCCGCAT TTTACGGCGA TCTCCTTGGC CTGCCGCTGG CGCTCGATCA GGGGACGTGT
CGAATTTATT GCGTCGCCAG TGATGCGTAC CTGGGGGTGT GCCAGCGCAA TGATACTACT
GCGCCTCCAA TGCCTGGATC GCTCATTTTG ACCCTGGTGA CGCACGACGT TGACGAATGG
CATCGCTATC TTGCGGATCG TGGCGTGACT GTTGCGCAAC CGCCGCAGTA CAACCCCCAC
TTCAATATCT ATCACTGCTT TCTGCGCGAC CCGGACGGGC ACCTGGTCGA AATCCAGCGG
TTTCTCGATC CAGCGTGGCC CCGTGCGAGG TAA
 
Protein sequence
MRPASFEQFV TFIYVRDLNA SAAFYGDLLG LPLALDQGTC RIYCVASDAY LGVCQRNDTT 
APPMPGSLIL TLVTHDVDEW HRYLADRGVT VAQPPQYNPH FNIYHCFLRD PDGHLVEIQR
FLDPAWPRAR