| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1735 |
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| Symbol | mnmA |
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| ID | 5539213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2229739 |
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| End bp | 2230890 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893874 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001431845 |
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| Protein GI | 156741716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTACCG CTTTTTGCAG TGAAGTCATT ATTCCAATGG CGAAGATCAT GATAGCCATG
AGCGGCGGTG TGGACAGTTC CCTGGCGGCT GCGCTGCTCC ACGAAGCCGG GCACGACGTC
ACCGGCGTCA CCCTGCATCT CTGGGAGGGC GACGATGACC GCCTGGCGGA GAGCCTCTGC
TGCTCCCAGG AGATGACCGA AAGCGCCCGT CGCGTGTGCG CACAACTCGG CATACCATAC
TATGTCTTCA ATTATCAACG CGAGTTTCGG CGCTCTGTGA TCGAATATTT TTTGCGTGAA
TACGCCAGCG GCTTCACGCC CAACCCATGC CTGGAGTGCA ACCGCGAGAT CAAGTTCCGC
GCGCTGCTGG CGCGCGCGCG CGCCCTGGGG TTCGACTATG TTGCCACCGG GCATTATGCC
CGCATCCGTG TTGATAAGAC ACCTGCCGAT CACTCCGCCT CCCCATCGCC GAATGGCGCC
CAACGCGCCG TTTACCGGCT GCTGCGCGCC GTCGATGAGG AGAAGGATCA GTCGTACATG
CTCTATATGC TCGGTCAGGA CGACCTGGCG CGGCTGATGT TTCCAATTGG CGAGTACACC
AAGGCAGAGG TTCGCGCCCT GGCTGCCGCG CGCGGACTGG CAAGCGCCAA CCGACCGGAG
AGCCAGGACA TTTGTTTCGT CCCCGGCGGC GACTACCGCA ACCTGCTGCG TGAAGAGCGC
CCCGATGCGC TGCGTCCTGG ACCGATCCTC GACCTTGAGG GGCGCGAGGT GGGCCGGCAC
CAGGGATTGC CGCTCTATAC CATCGGGCAA CGGCGCGGTC TTGGCATTGC GACCGGTCAA
CCGATGTATG TGATGGCGCT CGACGTGGCG CGCAACGCGG TGATCGTCGG TCCTGAATCG
GCGCTCCGGC GCACAACGCT GCGCGCTGAA CGAGTAACCT TCGTCAGCGG TTCCTGGCCC
GAGGCGCCGT TCGACTGTCT GGCGCAGATT CGGGCGCATG CCGATGCCGT TCCGGCGCGG
GTGACTCCCG TCGAGCCGGA GCGTGTCGAG GTGCGCTTCG AGCATCCGCA GCGCGCCATT
ACCCCAGGGC AGGCAATCGT CTTCTACGAC GGCGCAGTTG TGCTTGGGGG CGGACGGATT
GCGCGCGACT GA
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| Protein sequence | MVTAFCSEVI IPMAKIMIAM SGGVDSSLAA ALLHEAGHDV TGVTLHLWEG DDDRLAESLC
CSQEMTESAR RVCAQLGIPY YVFNYQREFR RSVIEYFLRE YASGFTPNPC LECNREIKFR
ALLARARALG FDYVATGHYA RIRVDKTPAD HSASPSPNGA QRAVYRLLRA VDEEKDQSYM
LYMLGQDDLA RLMFPIGEYT KAEVRALAAA RGLASANRPE SQDICFVPGG DYRNLLREER
PDALRPGPIL DLEGREVGRH QGLPLYTIGQ RRGLGIATGQ PMYVMALDVA RNAVIVGPES
ALRRTTLRAE RVTFVSGSWP EAPFDCLAQI RAHADAVPAR VTPVEPERVE VRFEHPQRAI
TPGQAIVFYD GAVVLGGGRI ARD
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