Gene Rcas_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1730 
Symbol 
ID5539208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2226464 
End bp2226994 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID640893869 
Productsmall GTP-binding protein 
Protein accessionYP_001431840 
Protein GI156741711 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACGG TAAAAATGGT TATCAGCGGC GCAGTCAACG CCGGAAAAAC CGAGTTCATC 
AAGACGATCA GCGAAATCGA AGTGGTTTCG ACCGAACGTC CCGCAACTGA TGATACCCGG
CTGATTAAGA AGGAAACGAC AGTTGCTATG GACTTCGGGC GCATTGCCAT CGGCGATGAC
CTGGTGCTGC ACCTGTTCGG CACGCCAGGG CAGAAGCGAT TCGATTTTAT GTGGGAAATC
CTCTCGGAGG GGATGCTGGG GCTGGTCATC CTTGTCGATA GTACGCGCCC CGAAACATTT
CGCGAAACCA ATCGCATCAT TGATTTCTTT ATGTCGTACC GTGAGACCCC CTACGTGGTG
GCAGCCAATA AGCAGGATCG CCCCAACGCC TGGTCGCCGG AAGAGTTGCG CCTGGCGCTG
CGCCTTCCTT CCCATATCAA AGTGTTGCCC TGCATGGCGA CGGAGCGTGA GAGTGTCAAG
AATGTGTTGC TCGAATTGCT CGATGTCATC ATGCAGCGCA GCGAGGATTA A
 
Protein sequence
MQTVKMVISG AVNAGKTEFI KTISEIEVVS TERPATDDTR LIKKETTVAM DFGRIAIGDD 
LVLHLFGTPG QKRFDFMWEI LSEGMLGLVI LVDSTRPETF RETNRIIDFF MSYRETPYVV
AANKQDRPNA WSPEELRLAL RLPSHIKVLP CMATERESVK NVLLELLDVI MQRSED