Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1730 |
Symbol | |
ID | 5539208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2226464 |
End bp | 2226994 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640893869 |
Product | small GTP-binding protein |
Protein accession | YP_001431840 |
Protein GI | 156741711 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGACGG TAAAAATGGT TATCAGCGGC GCAGTCAACG CCGGAAAAAC CGAGTTCATC AAGACGATCA GCGAAATCGA AGTGGTTTCG ACCGAACGTC CCGCAACTGA TGATACCCGG CTGATTAAGA AGGAAACGAC AGTTGCTATG GACTTCGGGC GCATTGCCAT CGGCGATGAC CTGGTGCTGC ACCTGTTCGG CACGCCAGGG CAGAAGCGAT TCGATTTTAT GTGGGAAATC CTCTCGGAGG GGATGCTGGG GCTGGTCATC CTTGTCGATA GTACGCGCCC CGAAACATTT CGCGAAACCA ATCGCATCAT TGATTTCTTT ATGTCGTACC GTGAGACCCC CTACGTGGTG GCAGCCAATA AGCAGGATCG CCCCAACGCC TGGTCGCCGG AAGAGTTGCG CCTGGCGCTG CGCCTTCCTT CCCATATCAA AGTGTTGCCC TGCATGGCGA CGGAGCGTGA GAGTGTCAAG AATGTGTTGC TCGAATTGCT CGATGTCATC ATGCAGCGCA GCGAGGATTA A
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Protein sequence | MQTVKMVISG AVNAGKTEFI KTISEIEVVS TERPATDDTR LIKKETTVAM DFGRIAIGDD LVLHLFGTPG QKRFDFMWEI LSEGMLGLVI LVDSTRPETF RETNRIIDFF MSYRETPYVV AANKQDRPNA WSPEELRLAL RLPSHIKVLP CMATERESVK NVLLELLDVI MQRSED
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