Gene Rcas_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1716 
Symbol 
ID5539194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2213941 
End bp2214447 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content61% 
IMG OID640893855 
Producthypothetical protein 
Protein accessionYP_001431826 
Protein GI156741697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC GACAGAATGC GCGACACCGG CGCTATGAAG GCAGCGCCGA AACAAGAACG 
TTCATTGCGT TGATGGCTCT GTGCATCATA ACGCTGCTGG CAGCCGTCGG ATTGGGATTC
AAGATGCGCG ACAGCGATCT GGGGAGGTCC ATCACGCAGG TGCTGACCGG GGGTGCGTCG
AGGCAGACGC CGGGTATTCA GGGACCGGGT TCTCAATCGC CGCTGGTGCA TGCGCCGGAT
GTGACAGCGC CGGATGTGAC AGCGCCTGAT ATTCAGCTTC CCAACCTTCC GAGCGTCGGA
GCGCCGGTCA TCGGCGCGCC TGCTGCCTCG ACGGTCGGCA CGGGTGATGT GGTCGTACTG
TTCAGCATCG GCGTCGTCCT CCTGACCATG GAATACGTCA TTGCGTGGAT GACAACAGGG
ATGCTGGTCG TACTGTTCAG CATCGGCGTC GTCCTCCTGA CGGTGTCTGG TCTCTTGTAC
GTGAGGCTGC GTATGAGAGC CGAATGA
 
Protein sequence
MNARQNARHR RYEGSAETRT FIALMALCII TLLAAVGLGF KMRDSDLGRS ITQVLTGGAS 
RQTPGIQGPG SQSPLVHAPD VTAPDVTAPD IQLPNLPSVG APVIGAPAAS TVGTGDVVVL
FSIGVVLLTM EYVIAWMTTG MLVVLFSIGV VLLTVSGLLY VRLRMRAE