Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1708 |
Symbol | |
ID | 5539186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2203539 |
End bp | 2204360 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640893847 |
Product | transposase IS4 family protein |
Protein accession | YP_001431818 |
Protein GI | 156741689 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGCAC CGAGCCAGCC GGCTGTCCAG AGCGAGACGT ACGCGACCGA CCTGACTGAT GCGCAGTGGG AGCAGATCCG CCCATTTGTC GAGATACAGG CCAAGACCGG GCCGAAGCGG AGGGTCGACC TGCGAGCCGT GCTCAACGGC TTGCTCTACA AACTGAAGAC CGGGCGCCAG TGGGAACTGC TGCCGCGCTC GTTTCCGCCC AAGAGCACGG TCCACTACTC CTTTCAGCAG TGGACCAAGA AAGGCATCCT GGTGCGGATC AACGACGCGT TGCGCCGACG GGTGCGGGTC GAGGCGGAGG GTCGGGAGAA CGTCGAGCCT ACAGGTGGGG TGATCGACGC CCAGAGCGCC AAGAGCAGCA TTGCCGGGGG GCCGGAACGG GGCTTCGACG GGGGGAAACA GGTCTATGGG CGCAAGCGCC ATCGGCTCGC CGACACGCTG GGTTTGCTGA TCACGGCTTG TGTTCACTCG GCGCGAGCGT ATGACGGAGC AGCTGCCAAG CAGGTGTTCA CCGCGACCAA AGCGCGCGGC ATCGCGCTGA AGAAGGTATG GGCAGACCAG ACCTATCGTG GTGTGTTGGG CCCGTGGATG GCGGCCAATG GCATGGGTGA GTTGGAGATT GTCGAGCGGC TGCCGGGGCA GCGCGGCTTT CAGGTCCAGC CGAAGCGCTG GGTTGTCGAG CGAACCCACG CCTGGTTGAG CGGCAATCGT CAGCTGAGCC GAGAGTATGA CCATAACCCG CGTCACTCCG AAAGCTGGCT CTACCTCGCC TCGATCCGCC TCCTCGGCCG CCGTCTCGCC AAAGCGTCGT GA
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Protein sequence | MGAPSQPAVQ SETYATDLTD AQWEQIRPFV EIQAKTGPKR RVDLRAVLNG LLYKLKTGRQ WELLPRSFPP KSTVHYSFQQ WTKKGILVRI NDALRRRVRV EAEGRENVEP TGGVIDAQSA KSSIAGGPER GFDGGKQVYG RKRHRLADTL GLLITACVHS ARAYDGAAAK QVFTATKARG IALKKVWADQ TYRGVLGPWM AANGMGELEI VERLPGQRGF QVQPKRWVVE RTHAWLSGNR QLSREYDHNP RHSESWLYLA SIRLLGRRLA KAS
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