Gene Rcas_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1705 
Symbol 
ID5539183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2201423 
End bp2202280 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content64% 
IMG OID640893844 
Productaldo/keto reductase 
Protein accessionYP_001431815 
Protein GI156741686 
COG category[R] General function prediction only 
COG ID[COG1453] Predicted oxidoreductases of the aldo/keto reductase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.292927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCA CTGCCCCGTT TGGCCGCACG GGCCACCACA GCACTCGCGC CATCTTCGGC 
GCTGCGGCGC TCAGCCGCGT TTCTCAGGAG GACGCTGACC GCACACTGGA TCTGATCTTG
CAGTATGGGG TCAATCATAT TGACACGGCT GCCAGTTATG GCGACAGCGA ACTGCGGATC
GGTCCCTGGA TGCGGGAACA TCGTTCGCGT TTCTTTCTGG CGACGAAAAC CGGTGAACGC
ACCTATCAAC GCGCGCGCGA TGAAATTCGC CGTTCGCTCG AGCGCCTGCG CGTCGATCAG
ATCGACCTGA TTCAGTTGCA CAACCTGGTC GACCCGCAGG AGTGGGAGCA GGCGCTTGGT
CCTGGCGGCG CGCTCGAGGC GGCAATCGAA GCGCGTGAAC AGGGGCTGGT GCGCTTCATC
GGCGTCACCG GTCACGGCGT AACGGTCGCA GCGCAGCACC GCCGCGCGCT CGAACGCTTC
CCGTTCGATT CGGTGCTGCT GCCGTACAGT TACATTCTGA TGCAGAACCC GCAGTATGCC
GCCGACTTCG AGGCGCTTGC GGCGGTCTGC CGTGAGCGCG GCGTCGCAAT GCAGACGATC
AAGGCGATCA CGCAGGCGCC CTGGGGTGAG CGTGAGCGTG CATACGCGAC GTGGTACGCG
CCGCTTGAGG ATCAGGCGGA CATCGATCTC GCAGTGCACT GGGTGCTGGG TCGTCCAGAC
GTATTCCTCA ACACGGTCGG CGACATCGCG TTGCTGCCGC GTGTGCTCGA TGCGGCGAGC
CGCTTCCAGT CGCGCCCAGG CGACGAGGAA ATGGAGCGTC TGGCGGCGGA GCGTCAGATG
GCGCCGCTGT TTGTGTAG
 
Protein sequence
MIPTAPFGRT GHHSTRAIFG AAALSRVSQE DADRTLDLIL QYGVNHIDTA ASYGDSELRI 
GPWMREHRSR FFLATKTGER TYQRARDEIR RSLERLRVDQ IDLIQLHNLV DPQEWEQALG
PGGALEAAIE AREQGLVRFI GVTGHGVTVA AQHRRALERF PFDSVLLPYS YILMQNPQYA
ADFEALAAVC RERGVAMQTI KAITQAPWGE RERAYATWYA PLEDQADIDL AVHWVLGRPD
VFLNTVGDIA LLPRVLDAAS RFQSRPGDEE MERLAAERQM APLFV