| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1700 |
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| Symbol | |
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| ID | 5539178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2194244 |
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| End bp | 2195182 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893839 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001431810 |
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| Protein GI | 156741681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0275555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA TCATCATTCC AAACTACAAT GGCGCCTCTC TTCTGCCGAC ATGCCTCGAC
TCGCTGCGGG CGCAGACACG GCGCGATTTC TGCGTGGTTG TCGTGGATGA CGGTAGCGCC
GATGATTCGG TCGCTCTGGT GCAGCGGCGT TATCCTGAAG TGCAGGTCAT CGCACTGCCG
CGCAATCGCG GGCTGGCGGC GGCGGTCAAT ACCGGCATCG AAGCGACCGG TGGGGAGTAT
GTTGTCCTGC TCAACAACGA CACCGAGGCG CATCCGCGTT GGCTGGAACA TCTGATCGGC
GCATTGGATC GCTATCCGGC ATATGCGTTT GCCGCCAGCA AAATGATGTT GTTCGACCGG
CGCGACCACA TTCATTCAGC GGGCGATTAC TATCGCTTCG ATGGCGTTCC CGGCAGTCGC
GGCGTCTGGC AACGCGATGT GGGGCAGTTC GATGTGATGG AAGAAGTGTT TGGTCCCTGC
GCCGGCGCTG CGGCATATCG GCGAGCGGCG CTGGAGGAAC TGGCGGAGGA CGGCAGGGTC
TTCGATGAGG ACTTGGTGAT GTATTGTGAA GATGTCGATC TGAACGTGCG CGCCAGATTG
CGCGGTATGC GCACCGTATA CGTGCCGCGT GCCGTGGTAT ATCATCGATT GAGCGCAACG
GGGGGCGGCG CGCTGGCGAG TTACTACTGT GGGCGCAACT TTATGCTTGT GTGGACAAAG
AATATGCCGG CGCCCCAGGT GCGACGCTAC CTGCCCCTGC TGATCTGGTC GCAGATCCGG
TTTGTCGTGC ATTCACTCTG GCATATCCGC GAACCGGCAG CGCGCGCCCG TTTGCGTGGT
CAGTTTGATG GGTTGCGTAC ACTGCCTCGA TTTGTGCGCA AGCGGCGCCA CACGACAGGC
AGGGATGCCG GTCGGCTTGT TGTTGAAACA CGCTATTGA
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| Protein sequence | MIDIIIPNYN GASLLPTCLD SLRAQTRRDF CVVVVDDGSA DDSVALVQRR YPEVQVIALP
RNRGLAAAVN TGIEATGGEY VVLLNNDTEA HPRWLEHLIG ALDRYPAYAF AASKMMLFDR
RDHIHSAGDY YRFDGVPGSR GVWQRDVGQF DVMEEVFGPC AGAAAYRRAA LEELAEDGRV
FDEDLVMYCE DVDLNVRARL RGMRTVYVPR AVVYHRLSAT GGGALASYYC GRNFMLVWTK
NMPAPQVRRY LPLLIWSQIR FVVHSLWHIR EPAARARLRG QFDGLRTLPR FVRKRRHTTG
RDAGRLVVET RY
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