| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1697 |
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| Symbol | |
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| ID | 5539175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2190868 |
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| End bp | 2192532 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893836 |
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| Product | peptidase M9A collagenase domain-containing protein |
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| Protein accession | YP_001431807 |
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| Protein GI | 156741678 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.367258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00906719 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCGCA CTACGCCTGC AATCCTGCTC TTGGTCCTCG TCCTCACCAC TACCGCGCCG
TCGCCGCTAC AACCGCCGCC GACGCCCGCC TGTCCGCGCA CCTACCACAT CGGACCGCAC
TCGCTCATCG TGATGCTCTA TGCGTCGGGA TACGACTGCA CTGAAGAGAT TGCGCACGCG
CTTGCCGCTA TTGCCGATGA TCAGATTCTC GAACGTCTGA TCGCCCTGAC CGCTCCCGAC
TTTCACAGTC TGACCCGCCG CAACGCCCTG CGCGTCATCG GTCGCATGGC GGAGCGTCCG
CCGCGCGAAC CTGCGCACCG CGTTGTGGCG CGCGCCGCGC CCGCGCTCCG CATTCATCTG
TTGACCCTGC TGCACACCGA TCCCCACGAT GATGTGCGGG CCGACGCAAT CTGGATTCTC
GACACCTTTT TCTTCCCGGC GTATGACGCA CAACCCGCTT TTACCACCAT TGCGCTCACG
CCTGGCAGCG GGGCAAATCT GCGCACCCGC GCTGCATACG CTGCCGCGCG GTTGATTGCC
ACCCGCGTCG GACCGCTCCA CGACGACGAT CTGGCGTTTC TTCTGGCAGG ATTGCAATCC
GACGAGCCAG GCGTGCGCGC GCGCGCCGCC GACGCCATTG CACGCCTGCG CGACGATCAA
CTCGACGTGG CGGCGCGCGC GCGCGTCACC GCAGCACTGG AAGACGCCTG GACATCCGCC
GCGCGCCTGG CGCCAGCCGA TGCGCTCCCC AGCGCGCCTC CCGCCATCCA TGCCGGGCGC
TTCATCTCCG GCATTCCTGA AACCTCGCCG GGACCATTCG CTGCGCGCGC GGCATTGGCG
CGCGCCCTCG ACCGCTTCGG CGGCGAGCGA TTCGCCGTGC TGCGCGCAGA GTTCGAGACC
ATTCATCTCT CTTCGTGCCT CGATCAGCGC ACCGTGCGAA TCTGCACCGG ATCATCCACA
GCCAACCTTT CCGCCATCAC CGCGCAACTG GAACGCCTGC GCACCTTTTT CTTCGACCTG
ACCGGCATCA CCGATCCTGT GCCTGGCGAT CCGCACGAGC AACTCACGAT TAAGATATTT
GCCAACCGCA GCGTCTTTCG AGAGTACATG CTGGCATTCG TCGGCTTCGG CGCCGATGTT
GACGGCATAT ACGTCGAGCG CGACGGCGTT CTCTTCACCT ACGAGCGTAA CGCTGCCGAA
AGCGTCAACA CCACCGACGA GACTATCGCC CATGAGTTCG GTCACTACCT GAACGGACGA
TACCTCTTCC CCGGCGTCTG GCACGATCCT GGCTACCATG CCGAGCCGAA AGGATGGTTC
GACGAAGGCA TCGCCGAATA CCTCGCCGCC CTCAGCGACT CTGGCGCCGG ATCGCGCGCC
GCACTCGACC GCCTCTGCAC TCATTCCGTT CCACCCGATC TGGCGCGCCT GCTGGGGCAG
CGCGATGGAT ATGATCAGTA TGGCACATTC GCGTATGATG AGGCGTGGGC GTTCGTGACA
TTTTTGCATC AGGAGCGACC ATCCGCCATC CGCGCGATTG CGGCGGCTTT TCGCGCCAAC
ACCTACCGCC AGAGCGACGT GCCGGATCTC GTCGGCGCAC CGTCGCTCGC CACAATCGAG
ATGGAATGGC ACGCCGCACT GGTACGCTGG TGCCGTCAGC GATGA
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| Protein sequence | MPRTTPAILL LVLVLTTTAP SPLQPPPTPA CPRTYHIGPH SLIVMLYASG YDCTEEIAHA
LAAIADDQIL ERLIALTAPD FHSLTRRNAL RVIGRMAERP PREPAHRVVA RAAPALRIHL
LTLLHTDPHD DVRADAIWIL DTFFFPAYDA QPAFTTIALT PGSGANLRTR AAYAAARLIA
TRVGPLHDDD LAFLLAGLQS DEPGVRARAA DAIARLRDDQ LDVAARARVT AALEDAWTSA
ARLAPADALP SAPPAIHAGR FISGIPETSP GPFAARAALA RALDRFGGER FAVLRAEFET
IHLSSCLDQR TVRICTGSST ANLSAITAQL ERLRTFFFDL TGITDPVPGD PHEQLTIKIF
ANRSVFREYM LAFVGFGADV DGIYVERDGV LFTYERNAAE SVNTTDETIA HEFGHYLNGR
YLFPGVWHDP GYHAEPKGWF DEGIAEYLAA LSDSGAGSRA ALDRLCTHSV PPDLARLLGQ
RDGYDQYGTF AYDEAWAFVT FLHQERPSAI RAIAAAFRAN TYRQSDVPDL VGAPSLATIE
MEWHAALVRW CRQR
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