| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1696 |
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| Symbol | |
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| ID | 5539174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2189309 |
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| End bp | 2190679 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893835 |
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| Product | peptidase dimerisation domain-containing protein |
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| Protein accession | YP_001431806 |
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| Protein GI | 156741677 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.151235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00152068 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTGGC AGACATATCT GCGCGAACAG CAAGACCGGT TCCTTGCCGA GTTGCTCGAT
TTCCTGCACA TTCCGAGTGT GTCGGCGCTG CCAGAGCACG CGGGTGATGT GCAGCGTGCG
GCGGAGTGGG TGGCGGAACG GATGCGCACC GCCGGGATCG AGTCGGTGCA GATTTTGCCA
ACCGGCGGGC ATCCCGTCGT GTATGGCGAT TGGTTGCACG CGCCTGGAAA GCCAACGGTG
CTGATCTATG GGCATTTCGA TACGCAGCCT GCCGACCCGC TGGAGTTGTG GGAACATCCA
CCGTTCGAGC CGGTGGTGCG TGATGGACGG GTGTATGCGC GTGGCGCATC GGACGACAAG
GGAAACATGC TGCCGCCGAT CCTGGCAGTT GAGGCATTGT TGCGCACAAC GGGCGCGCTG
CCGGTGAATG TCCGCTTTCT CTTCGAGGGC CAGGAAGAGA TCGGCAGCCC GCAGATTCCG
GCATTTGTGA AGGCTCACCG CGAGATGCTG GCGTGCGACC TGGTGGTGAG CAGCGATGGC
GGGCAGTGGA GCGAGACCGA GCCGGTCATC CTCACCGGTC TGCGCGGCGG ATGTGGCGTA
CAGATCGATG TGCGCGGTCC GAACCGGGAC CTCCATTCCG GCATTTACGG TGGCGCAGTG
CAGAACCCGA TCCATGCGCT GGCGTCCATT CTTGCGTCGA TGCGCGGCGC CGACGGGCGC
ATTCTGGTCG AAGGGTTCTA CGATGCGGTG CAACCGCTGA CCGATGACGA GCGTCGGCGG
TTCGCGTCGG CCCCCTTCGA TGAAGCCGCA TATATGGCGG ACCTGGGAGT GACGGCATTG
TGGGGAGAAG CCGGATACAC TGTCTACGAA CGCACCTGGG CGCGCCCCAC GCTGGAGATC
AATGGCGTCT GGGGCGGATT CCAGGGCGAG GGAGTGAAGA CGGTCCTGCC GGCTGAGGCG
CATGCCAAGA TTACCTGCCG ACTGGTCGCC AATCAGGACC CGGCGACGAT TGTGGAGTTG
ATCAAGGCGC ATGTGCAACA GCACACACCG CCAGGAGTCA CGGTAGCGGT CACGCCGCTG
AAATTTCTGG CGAAGCCGTA CCTGATGCCA TTCGATCATC CGGGAAACCG TGCCGCGCGC
GATGTGCTGG TTCACATGTA CGGACGCGAA CCGTATGAAG TGCGTAGCGG CGGCAGTATT
CCGATCTGCA CTATCTTGCT GGACGAATTA GGGGTATACA CGGTCAATTT CGCCTTCGCG
TTAGAAGATG AGCGTCAGCA CTCGCCGAAC GAATTCTTCC GCCTGAGCAG TTTCCGTCGT
GGGCAGGAGG GGTACTGCCT GTTGTTGGAG CGATTGGCGG ATGTGGGGTA G
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| Protein sequence | MTWQTYLREQ QDRFLAELLD FLHIPSVSAL PEHAGDVQRA AEWVAERMRT AGIESVQILP
TGGHPVVYGD WLHAPGKPTV LIYGHFDTQP ADPLELWEHP PFEPVVRDGR VYARGASDDK
GNMLPPILAV EALLRTTGAL PVNVRFLFEG QEEIGSPQIP AFVKAHREML ACDLVVSSDG
GQWSETEPVI LTGLRGGCGV QIDVRGPNRD LHSGIYGGAV QNPIHALASI LASMRGADGR
ILVEGFYDAV QPLTDDERRR FASAPFDEAA YMADLGVTAL WGEAGYTVYE RTWARPTLEI
NGVWGGFQGE GVKTVLPAEA HAKITCRLVA NQDPATIVEL IKAHVQQHTP PGVTVAVTPL
KFLAKPYLMP FDHPGNRAAR DVLVHMYGRE PYEVRSGGSI PICTILLDEL GVYTVNFAFA
LEDERQHSPN EFFRLSSFRR GQEGYCLLLE RLADVG
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