| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1695 |
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| Symbol | |
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| ID | 5539173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2187594 |
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| End bp | 2188829 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893834 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001431805 |
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| Protein GI | 156741676 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0207768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000479364 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACACGT CACCCAATGC TCGAACAATC GCACTTCTGT TGCTGACCCT CATTCTCGCC
GGGTGCGGCG ATCTCGGCGG ATTGCTCGGC AACCAGCCCA CTCCTGCACC GATCATCCTC
ATCGCAACCG CCACACCCGT ACCGCCGAGT CAGGCGACCC CGACGACAGA CATTGTTCCA
TCGCCGACAG TTGCGCCACC CGACACTCCG GTGGCAACCT CCGTCCTACC GACTGCTGCG
CCTCCCACAC CCACACCCGC ACCGCAAAAA ATCCTGGCGC GCGTCAAAGA GCGTGGCTAT
CTGATCTGTG GAACGAACGC CGATCTGCCG GGGTTCGGCT TCTACGACAA CGTGCGCCAG
GCGTGGAGCG GCTTCGATGT CGATTTCTGC CGCGCCGTCG CTGCTGCCAT CTTCGGTGAT
GCCACAAAAG TGGAGTTCGT CGCGCTCGGC ACCGGACCAG GACCCAACAA CCGGTTCGAT
GCTGTGCGTG AAGGGCGCGT CGATGTCCTG TTCCGTAACA CGACATGGAC ACTTGGACGC
AACATCAGCG GGTTGGCATT CGGTCCCACC ACCTTCCACG ATGGTCAGAC CTTCATGGTG
CGCATCAGGG ACCGGATCAC CAAACTGGAA GACCTCGCAG GCAAAGTCAT CTGTGTGGCG
AAAGGCACCA CCAGCGAGCA AAACCTGAAC GACGACTTTG CCGCGCGCGG CATTCAGTTC
ACTGCCCGCG TCCTCAATGG CGAAGACGAA CTCTACCCGG CGTATGATGA AGGGGAGTGC
GACGCAGTGA CCAGCGACAG TTCACAACTG GCAGCCAAAC GTCAGCAACT CAAGAATCCC
GCCGACCACA TCATCCTCGG CGACCGCATC TCACGCGAGC CGCTCGGTCC GGTCATCGCC
CGCGACGACA ATCAGTGGCT CGACGTGATC AGCTGGACGG TCTTTGCCAC GATTTACGCC
GAAGAACTGC GTGTTGATCA GCGCAATGTC GATCGTCTGC GCGCCAGCAC GACCGATCCG
CGTATCAAAC GGCTGCTAGG GCTGGAAGGA AACTTCGGCG AGGGATTGGG GTTGCCGAAC
GACTTCGCCT ATCAGATTAT CAAGCAGGTC GGCAACTACG GCGACATCTA CAACCGTAAC
CTGGGACCGA ACACCGTCAT CAATCTGGAT CGCGGTCCGA ACAAAGTCTG GAACCTTGGC
GCTGGCGGCG TGCTTGCCTC CCCGCCGTTT CGTTGA
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| Protein sequence | MHTSPNARTI ALLLLTLILA GCGDLGGLLG NQPTPAPIIL IATATPVPPS QATPTTDIVP
SPTVAPPDTP VATSVLPTAA PPTPTPAPQK ILARVKERGY LICGTNADLP GFGFYDNVRQ
AWSGFDVDFC RAVAAAIFGD ATKVEFVALG TGPGPNNRFD AVREGRVDVL FRNTTWTLGR
NISGLAFGPT TFHDGQTFMV RIRDRITKLE DLAGKVICVA KGTTSEQNLN DDFAARGIQF
TARVLNGEDE LYPAYDEGEC DAVTSDSSQL AAKRQQLKNP ADHIILGDRI SREPLGPVIA
RDDNQWLDVI SWTVFATIYA EELRVDQRNV DRLRASTTDP RIKRLLGLEG NFGEGLGLPN
DFAYQIIKQV GNYGDIYNRN LGPNTVINLD RGPNKVWNLG AGGVLASPPF R
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