Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1692 |
Symbol | |
ID | 5539168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2182439 |
End bp | 2183878 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893829 |
Product | pyruvate kinase |
Protein accession | YP_001431802 |
Protein GI | 156741673 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0469] Pyruvate kinase |
TIGRFAM ID | [TIGR01064] pyruvate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.309469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000134054 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGACAGAGC AGGAGCATAT GCGCCGCACA AAAATTGTCG CAACGATCGG ACCGGTCAGC AGCAGCCCTG AGATGATCGA GCGATTGCTG ACCGCCGGGA TGGATGTCGC GCGTCTCAAC TTTTCCCACG GAACCCATGA AGAGCATGCT CAACGGATTC AGGTCTTGCG CGACATTGCA GCGCGCAAGG AGCGCCCCCT GGCGTTGCTC CAGGACCTGC AAGGACCAAA GATTCGCACC GGACCGCTGG TTGACCGCAA GCCGGTGATG CTGCGCGCCG GTGACCGGTT CACAATCACA ACGCGGAACG TACCGGGCAC AGCGAGTCTG GTCAGCACCA CCTACGCCGC CCTGCCGCGC GATGTGCATC CCGGCGATCG GATTCTGATC TCCGACGGAC TGATCGAAGC GCAGGTCGTG CGCGTTTCGG GCAGTGAGGT TGAGACCGAA ATCGTGGTCG GCGGCGAACT GCGCGAAAAC CAGGGCATCA ACCTGCCCGG GGTCGAAGTC AGCGCACCGG CATTAACCGA CAAAGACCGC AGCGACCTGC GGTTTGGTCT GGCGCATGGC GTCGATTACG TTGCGTTGTC ATTCGTGCGC CGCGCGTCGG ATCTGCTCGA AATCAAGGCG CAGATTACGG CTGCGGGCGC GTCTACGCCG GTGATTGCAA AGATCGAAAA GCCGGAAGCG CTGCGTGAAT TTGAAGCCAT TCTGGAAGCG GCGGACGGAA TTATGGTCGC GCGTGGCGAT CTGGGGGTCG AAATGCCGCC GGAGCAGGTG CCGATTGTGC AGAAGCAACT GATCGAAGCG GCGAACATGG CGGGCAAGCC GGTCATTACC GCAACGCAAA TGCTCGATTC GATGATCCGC AACCCGCGCC CGACGCGCGC CGAGGCGAGC GATGTTGCCA ATGCGATTAT CGATGGGACA GACGCCGTAA TGCTGAGCGG CGAAACGGCG ACCGGCGCCT ACCCCGTCGA GGCGGTGCGC ATGATGGCGC GCATCGCGGA TGTCACGGAA GCCAGCGGAC GGCGCGGTGA CCATAGTCAC GAGTCCATCT GGCGCTTCCA CGAGCAGCCG ACCGTCGCAG CCGCGATCAG TGCTGCGGTG CATGCGATTG TTCAGACCTT GCCGGTAACC TCAATTGTGG CATTCACTAT GAGCGGCAAT ACTGCCCGTC TGATAGCGCG ACAGCGACCA AAGACGCCGA TCTTCGCGTT CACTCCCTCA GAAGTGGTTT GCCGACGTTT GAACCTGATC TGGGGCGTGA CGCCTATTCT CAGCCCCTAT GTGGATCGGC TCGATGATCT GGAGAATGCA GTACGCAGCA CACTGCTGGG GCTGGGGTAC GCGCGACCCG GTGATCAGAT TGCGATAACC GGTGGGCACC CGATTGCTGC GCGCGGCACG ACGAACTTTG TGAAGGTGAC ACGGTTGTGA
|
Protein sequence | MTEQEHMRRT KIVATIGPVS SSPEMIERLL TAGMDVARLN FSHGTHEEHA QRIQVLRDIA ARKERPLALL QDLQGPKIRT GPLVDRKPVM LRAGDRFTIT TRNVPGTASL VSTTYAALPR DVHPGDRILI SDGLIEAQVV RVSGSEVETE IVVGGELREN QGINLPGVEV SAPALTDKDR SDLRFGLAHG VDYVALSFVR RASDLLEIKA QITAAGASTP VIAKIEKPEA LREFEAILEA ADGIMVARGD LGVEMPPEQV PIVQKQLIEA ANMAGKPVIT ATQMLDSMIR NPRPTRAEAS DVANAIIDGT DAVMLSGETA TGAYPVEAVR MMARIADVTE ASGRRGDHSH ESIWRFHEQP TVAAAISAAV HAIVQTLPVT SIVAFTMSGN TARLIARQRP KTPIFAFTPS EVVCRRLNLI WGVTPILSPY VDRLDDLENA VRSTLLGLGY ARPGDQIAIT GGHPIAARGT TNFVKVTRL
|
| |