| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1669 |
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| Symbol | |
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| ID | 5539145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2149112 |
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| End bp | 2150128 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893806 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431779 |
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| Protein GI | 156741650 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.700006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00242494 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAAG CCCGTCATCT GCACAAAGTC TTTGGAGCGT TCCACGCCGT GCGCGATGTG
TCGCTCACCG TCGATCCCGG CGAAGTCGTT GCGTTGCTGG GACCCAACGG CGCTGGGAAA
ACGACGACGG TTCGTATGCT GGGTGCGATC CTGCGTCCAT CGGAGGGGTA CGCGCGTGTG
GCAGGGTACG ATGTTGTCGA ACAGGCGCGC GACGTGCGCC GGGTTGTCGG GTTGCTCACC
GAGTTTCCCG GTCTCTATTT GCGCATGCGC CCGCAGGAAT ACCTCTGCTT CTTCGGCGCA
TTGCAGGGTA TGTCTGCCAC TGAAAGCGCC CGGCGCGCCG AACAGTTGCT GCGTCAGTTC
GGGCTATGGG AGGCGCGCAA TAAACGACTC GACAGTTTCT CGAAAGGCAT GAAGCAGAAG
GTGGCCCTGA TCCGGGCGCT CATTCACGAT CCCCCGGTGC TCTACCTGGA TGAGCCGACC
ACGGCAATGG ACCCGCACAG CGCCCGTCAG GTGCGCGATG CGATGCTGGA ACTACGCGCC
GCTAAACGCA CGATTCTGCT CACAACCCAC AATCTGACCG AGGCGGAGGA ACTTGCTGAC
CGGATCGTGA TTATCCGCAA TGGCTCGATT GTCGCCGAGG GCACATGTGC TCAGTTAACC
CGCCAGTTTC TGGGAGCGCC ACGGTGGGAA CTCCGCCTGG GAACCCCCGC ACAGCGCGCC
GTCGTGGTAC TCGATGGCAT GGTGTCGATC GAGCGTATCG ATGACGAACG GGTGTACTAC
CATACCGATG ATGCGCGCCA CGTCAATCCC CAGATCGTCG CGCGGCTGGC AGAAGCGGGG
ATTCCGATTG TGGCGCTCAA TGAACTGCCG CGTCGCCTGG AAGATGTCTA CCTCGAAATC
GTTGCCGGCA ACGGGCGAAC CGATGCCGGA CCATCCGTTG AGCCATCCGC CCGACACGAC
CGATCATCGC CAGCCGATCA ATCGACGTCG GAGGAGATGG TGAAGGTTGA GGGTTGA
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| Protein sequence | MIEARHLHKV FGAFHAVRDV SLTVDPGEVV ALLGPNGAGK TTTVRMLGAI LRPSEGYARV
AGYDVVEQAR DVRRVVGLLT EFPGLYLRMR PQEYLCFFGA LQGMSATESA RRAEQLLRQF
GLWEARNKRL DSFSKGMKQK VALIRALIHD PPVLYLDEPT TAMDPHSARQ VRDAMLELRA
AKRTILLTTH NLTEAEELAD RIVIIRNGSI VAEGTCAQLT RQFLGAPRWE LRLGTPAQRA
VVVLDGMVSI ERIDDERVYY HTDDARHVNP QIVARLAEAG IPIVALNELP RRLEDVYLEI
VAGNGRTDAG PSVEPSARHD RSSPADQSTS EEMVKVEG
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