| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1668 |
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| Symbol | |
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| ID | 5539144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2147527 |
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| End bp | 2148978 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893805 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431778 |
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| Protein GI | 156741649 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1300] Uncharacterized membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00126886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0026953 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCTG TAAGCGCGAT ACGCATCATT GTTCGCCGTG AAGTCAACGA CACACTGACC
GATTGGCGTA TTCTTGTGCC AATCTTTATT CTCACATTTG TGCTGCCACA ACTGTTGATC
GCTGCATCGA GCGTGGCAAT CGACTTTGTC GGCGATCGCG GGTCGGTCGT TCGTCTCATT
CCTTTCGCCA TGTTGCTGGT CGGCTTCATT CCCGCATCAT TTTCGCTGAT CACCGCGCTC
GAGTCGTTCG TCGGCGAACG GGAGCGCAAC AGCCTGGAAG CGCTGCTGTC GATGCCCCTC
TCTGACCATG CGCTCTACCT GGGGAAACTC CTTTCTGCGC TCATTCCGCC GCTCATGTCG
TCGCTCCTGG CGATGACCAT CTTTGGCATC TCGCTGCGCG TGCGTGAACC CGACCTCTTC
TTCGATGGAC TGACGTTCGA GTATCTGGTG GTGGTGCTGC TCCTGATCCT GGTGAAGGCG
GTGGTCATGG TCGCCGGAGC CGTGATCATT TCGAGCCATA CGACGAGTAT TCGCGCCGCC
AATCTGCTGG CAAGCTTCGT GTTGTTGCCG ACGGCGGCAA CCATTCAGCT CGAAGCGCTC
CTGATCATTG CGCGCCGCTG GGACGTGCTC TGGCTGGCGG TCGCGCTCCT GCTCGTGATC
GCCGCAGTGC TGACACGCAC CGGTATGGGG GCGTTCAACC GTGAAGAGAT TCTATCGCGC
GAGCACGAGC AGCTGAACCT GCGCCATATC GCGCAAACAT TCCTGACGTT TGCGCGTGAG
TATCAGCCGG CAGGCACGCC GCCGGAGGCC TACACCGGCG CGCCGTTCTC GCTGCGTCGG
TTCTACCGGC ACGACCTGCC TGCGCTCCTG CGCGACTATC GCACGCCATT GCTCGTGGCG
CTGCTGGCAG CAATCGCTGG CGCGCTGTGC GGTCCGCTCC TCGGAGGCTT CTTCGACCGG
ATCGGGCAGT CGCCGGGGCG CGTCGGCATC ACGCCGGAGC CGAGCCTGGC GCTTGGCATC
TTCACCGGCA TCGCCAACAG CGCGCGCCTG CTGATCACGG CGCTGCTGGC AACCTTCACG
TTCGGCATCT TTTCGCTCAT GGTGCCGTTC TTCGCCTTCG GCGGCATCGG GTACATCGCC
GGGGCGCTGA TGGCAGGCGG CGGCGACTGG CTGACGCTGG GACCCGATAG CCCGCTTCAG
TTTGTGATTG GCTATGTGCT GCCGCATGGC ATCATCGAAC TGCCCGCTGC CCTGCTCGGC
GCGGCGCTCG GCATCCGCAT CGGCGCCGCC GTGATGGCTC CGCCAAAAGG GTTCACCGTC
GGGCAGAATA TCCTCTGGTC GCTAGCGCAG TTCGGTAAAG TGTGGCTCTT CGTCATCCTG
CCGATGTTCC TGCTGGCAGG GATTGTCCAG CAACTGATCA CGACGCGCAT TCTGGCGGCG
CTGTACGGAT AA
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| Protein sequence | MSAVSAIRII VRREVNDTLT DWRILVPIFI LTFVLPQLLI AASSVAIDFV GDRGSVVRLI
PFAMLLVGFI PASFSLITAL ESFVGERERN SLEALLSMPL SDHALYLGKL LSALIPPLMS
SLLAMTIFGI SLRVREPDLF FDGLTFEYLV VVLLLILVKA VVMVAGAVII SSHTTSIRAA
NLLASFVLLP TAATIQLEAL LIIARRWDVL WLAVALLLVI AAVLTRTGMG AFNREEILSR
EHEQLNLRHI AQTFLTFARE YQPAGTPPEA YTGAPFSLRR FYRHDLPALL RDYRTPLLVA
LLAAIAGALC GPLLGGFFDR IGQSPGRVGI TPEPSLALGI FTGIANSARL LITALLATFT
FGIFSLMVPF FAFGGIGYIA GALMAGGGDW LTLGPDSPLQ FVIGYVLPHG IIELPAALLG
AALGIRIGAA VMAPPKGFTV GQNILWSLAQ FGKVWLFVIL PMFLLAGIVQ QLITTRILAA
LYG
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