| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1664 |
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| Symbol | |
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| ID | 5539140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2144872 |
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| End bp | 2145408 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893801 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001431774 |
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| Protein GI | 156741645 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0329621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00376352 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGACC GTCCATCCGC TGATGAGGTG TTGTTGATCG GTACGGTGGT CGATGCGTTT
GGACTACACG GCGAGATCAA GGTTCGATCG GTGACCGATC GCGTCGATCA CCTCCGCCAT
CATGTGCAGA CCGTTTTTGT GGGCGAAGAA CGCCGCCCGT TTCCCTTGCA GCGCATTCGC
GAGCCGAAGA CGGGGGTGCT GATCCTGACG CTTGGCGGCG TGACCGACCG GACGATGGCT
GAGGCGCTGC GCGGCGCAGA GGTGACCATC CGCGAATGTG ATGCTGCGCC GCTCGAGGCG
GATGAGTATT TCATTCATCA ACTGTATGGT TTGCGAGTGG TTGAGAGCAG CGGCGCAGAG
ATCGGCATCG TGCGCGAGGT GTTGCAAACC GGCGCTAACG ATGTGATCGT CGTCGAACGA
CATGGGCGCT CCGATACGCT GCTGCCAATG ATCCACGACG TGGTCGAATC CCTCGATGTG
GCTGCCGGGC AGATTGTGGT GCGTCTGTTG CCGGGCTTGA TCGATGAGGA AGGCTGA
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| Protein sequence | MEDRPSADEV LLIGTVVDAF GLHGEIKVRS VTDRVDHLRH HVQTVFVGEE RRPFPLQRIR
EPKTGVLILT LGGVTDRTMA EALRGAEVTI RECDAAPLEA DEYFIHQLYG LRVVESSGAE
IGIVREVLQT GANDVIVVER HGRSDTLLPM IHDVVESLDV AAGQIVVRLL PGLIDEEG
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