| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1662 |
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| Symbol | |
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| ID | 5539138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2143157 |
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| End bp | 2144194 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893799 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001431772 |
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| Protein GI | 156741643 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.363785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00433752 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGTTC CTTCCATTTC CCTGGTCTGC ACCGTTCGCG ATGAGGCGGA CAATATTGCA
GAACTGATCG ATTCGATGCT GGCGCAATCG TTGTTGCCGG ACGAGATTGT GATCAACGAC
TGCCAGAGCC GCGATGCAAC GCCACAGATC GTTGCCCGCT ACATTGCATG CGGAGCGCCC
ATTCGTCTGG TGCAGGGCGG TCACAATATC CCTTCGGGGC GCAATAACGC CATTCGCCAC
GCACGCGGCG CGCTGATCGC CTGTACCGAT GCCGGGCTGC GTCTCGAACC GCACTGGCTG
GAACGCATCA CGGCGCCTAT CCGTCGGGGC GATGCCGACG TGGTTGGCGG ATTCTTCCGC
CCTGCGCCGC GCAGCCTCTT TGAACTTGTG CTCGGCGCGA CCAACTACCG TGAGGCGGAA
GAGATCGATC CGGCGCGCTT TTTGCCCTTT GGGAAATCGT GCGCTTTTCG TCGTGAGGCG
TGGGAACGGG TCGGCGGTTA TCCAGAGTGG GCGAATCACT GCGAGGATGT ACTGTTTGCG
CTGGCGCTCA AACATCTCGG ATTTCGCTTC GCCTTCGCTC CCGATGCGCT GGTCTTCTTT
CGCCCGCGTT CGTCACTCGC CGCTTTTGCG CGGCAGTACT ACTTCTATGC GCGTGGTGAT
GGCGTCGCCG GTCTCTGGAC GCTGCGCCAT GCCGTCCGTT ACGCCACGTA TATCACGGCA
GCGATGCTGC TGCTGGCGAG CCGGCGGCAT TCGTGGACGC TGGCGCTGAT CGCAGCAGGT
GCATGCGCGT ATGTACGCGA TCCGCTGTGG CGTCTACGCC AGCGCGCTCC GGCGCTCGAT
GGCGTCAGTA TGTTGCGCGC GGCGTTGCTG ATCCCGGTGA TCCGTCTGGT CGGCGATGTT
GCCAAGATGA TCGGCTACCC CGTTGGTGTC GTCCAACGCC TGCGCTCGGC ATCGTTACGA
AGAAATGTCG TACATTACCG GAAGAGCGTC ACACTACAAC AGCACGACCT GACCGATGAG
CGACACACCG GCGCGTAG
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| Protein sequence | MDVPSISLVC TVRDEADNIA ELIDSMLAQS LLPDEIVIND CQSRDATPQI VARYIACGAP
IRLVQGGHNI PSGRNNAIRH ARGALIACTD AGLRLEPHWL ERITAPIRRG DADVVGGFFR
PAPRSLFELV LGATNYREAE EIDPARFLPF GKSCAFRREA WERVGGYPEW ANHCEDVLFA
LALKHLGFRF AFAPDALVFF RPRSSLAAFA RQYYFYARGD GVAGLWTLRH AVRYATYITA
AMLLLASRRH SWTLALIAAG ACAYVRDPLW RLRQRAPALD GVSMLRAALL IPVIRLVGDV
AKMIGYPVGV VQRLRSASLR RNVVHYRKSV TLQQHDLTDE RHTGA
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