| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1658 |
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| Symbol | tgt |
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| ID | 5539134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2137895 |
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| End bp | 2139112 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893795 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001431768 |
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| Protein GI | 156741639 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00193813 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTGA TATTCGAAAT CGAGGCGCGC GACACCCATA GCCGCGCTCG CATCGGACGG
ATCACCACCG CCCACGGAGT CATCGAGACC CCCGTGTTTA TGCCGGTCGG CACCCGCGGC
TCGATCAAAT CGTTGACCCC TGATGAGGTG CGTGACCACG GCGCGCAGAT TATTCTCGGG
AACACCTATC ATCTCTACCT GCAACCCGGG CACGAGTTGA TTGCGCGCAT GGGAGGATTG
CACCGTTTCA TGGGATGGGA AGGACCTATC CTGACCGATA GCGGTGGGTT TCAGGTGTTC
AGCCTGGTGT ATGGCGGGAT TGCCGACGAA ATTAAGGGTC GGCGACCGAC GCAGCAGGTG
CAGCCCGGTA TGGTGAGGGT TACCGATGAT GCCGTGATTT TCAAGTCGTA TATCGATGGT
TCGACCCATG TGTTCACTCC TGAACGGAGC ATTGAGATTC AGAAAGGCAT CGGCGCTGAC
ATCATACTCT GCTTCGATGA GTTGCCGCCG TTTCATGCCG GGTACGACTA CACTGCTCGT
TCACTGGAAC GCACCCACGA ATGGGAACGA CGCTGCCTGA TATTCCATCA GGAAACTCGC
GCGGGCGGGT TGCCATTTGC GCCGCCGAAT CCTGATCAGG CACTGTTCGG TATCGTTCAT
GGAGGCGTCT TTCCCGACTT GCGGCGAGCA AGCGCCGAAT ATCTGCGTGA ACTCTCATTC
GATGGGTTGT GTATCGGCGG TTCGCTCGGC GGCGACAAGG AACAGATGCG TGCTGTGGTG
GATATGACCG TGCCGCACCT GCCCGACCAT CTGCCGCGCC ACCTGCTCGG CATTGGTGAT
GTGGACGACC TGATCGAATG TGTGGCGCGC GGCATCGATA TGTTCGATTG CGTCAGCCCG
ACACGCCTTG GTCGGCATGG GACGGCGCTG GTACGCGATA TGAGCACGCT GCCGGCGCAG
CGGCGCTGGA AACTGAATGT GACCAATGCG TCGTTGCGCG ACGACCAGGA ACCGCTGGAC
TCGTGGTGTG ATTGTTATAC GTGTCAGCGT TATTCGCGCG CCTACATCCA CCACTTGTTT
CGCGCTCAGG AATTGCTCGG CATTCGGCTT GTCAGTCTGC ACAATGTCGC TTTCCTGCTC
AAACTCATGC GCGAGATTCG CCAGAGCATT CGTGAGGGGC GCTTCGCGCA ACTGCGCGCC
GAATGGCTTG GAGATTGA
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| Protein sequence | MTLIFEIEAR DTHSRARIGR ITTAHGVIET PVFMPVGTRG SIKSLTPDEV RDHGAQIILG
NTYHLYLQPG HELIARMGGL HRFMGWEGPI LTDSGGFQVF SLVYGGIADE IKGRRPTQQV
QPGMVRVTDD AVIFKSYIDG STHVFTPERS IEIQKGIGAD IILCFDELPP FHAGYDYTAR
SLERTHEWER RCLIFHQETR AGGLPFAPPN PDQALFGIVH GGVFPDLRRA SAEYLRELSF
DGLCIGGSLG GDKEQMRAVV DMTVPHLPDH LPRHLLGIGD VDDLIECVAR GIDMFDCVSP
TRLGRHGTAL VRDMSTLPAQ RRWKLNVTNA SLRDDQEPLD SWCDCYTCQR YSRAYIHHLF
RAQELLGIRL VSLHNVAFLL KLMREIRQSI REGRFAQLRA EWLGD
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