| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1648 |
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| Symbol | |
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| ID | 5539124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2128778 |
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| End bp | 2129860 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893785 |
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| Product | GTP-dependent nucleic acid-binding protein EngD |
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| Protein accession | YP_001431758 |
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| Protein GI | 156741629 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.227831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00399608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTG CCATTATCGG ACTCGCCAAC AGCGGCAAAA CTACGGTGTT CAACGCGCTG
ACCGGCGATA CGGCAGAAAC GACAACCTAT AGTTCCGGGC AATTGACCCC CAACCTGGCA
ACGGTCAAGG TGCCCGATCC ACGCCTCGAT GTGCTGGCGC GGATGTTCAA CCCCAAAAAA
GTCACCTGTG CCGATGTGCA GTATATCGAC ATTGGCGGGT TGAGCAGCGG CGCGCGCGAG
AGCGGCGGTC TTCCGCCGGC CGTGCTCAAC TATATCAGCG GCGCGGACGC CCTCCTCCAC
GTTGTTCGCG CATTCGAGGA CGATGCCGTG CCGCATCCAG ATGGCAGTGT CGATATCCTA
CGCGACATCG AGGCGGTCGA TCTGGAACTC GCCTTTTCCG ATCTTGCCAT CATCGAGCGG
CGTCTGACGC GCCTGAACGC CGAGATCGGC AAGATGTCGG CGAAGGAGCG TGAGATGCGC
ATCGTGGAAC GTGATGCGCT GGTGCGCATT CAGGCAGCGC TGGAGGGTGG CGCACCCATT
CGCGACCTCG ACCTGACCGC CGAAGAGGAG CGGCTGCTCC GCGGCTATCA GTTTCTCACC
GCCAAACCGT TGCTGCTGGC GATCAATATT GGTGAGAATC AATTGAAGCA TCCGCCGACG
GTCCGCTACG AGCATCGACG GAGCGGCGTG GCGACGCTCT GCGGCAAGAT CGAGGCTGAA
CTTGCGCAGC TCGACGAAGA AGAAGCGCGC GCCTTCATGG ACGATCTGGG CATCACCGAA
CCGGCGCGCA ACCGGGTGAT TGCGCTCTCG TATGAATTGC TCGGGCTCAT CAGTTTTCTC
ACCGCCGGTC CTGACGAGGT GCGCGCCTGG ACTATCCGCC GCGGTACGCC AGCCGTTGAA
GCTGCCGGCG TGATTCACTC CGATATTCAA CGCGGCTTTA TCCGCGCCGA AGTCGTCGCG
TTCGACGATC TGGCACGTGC CGGCAGCATG GTGGAAGCCC GCAAACACGG ACATGTACGG
ATGGAAGGGA AGCAGTACAT CGTGCAGGAT GGCGATGTGT GCCATTTTCT GTTCAACATC
TGA
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| Protein sequence | MKIAIIGLAN SGKTTVFNAL TGDTAETTTY SSGQLTPNLA TVKVPDPRLD VLARMFNPKK
VTCADVQYID IGGLSSGARE SGGLPPAVLN YISGADALLH VVRAFEDDAV PHPDGSVDIL
RDIEAVDLEL AFSDLAIIER RLTRLNAEIG KMSAKEREMR IVERDALVRI QAALEGGAPI
RDLDLTAEEE RLLRGYQFLT AKPLLLAINI GENQLKHPPT VRYEHRRSGV ATLCGKIEAE
LAQLDEEEAR AFMDDLGITE PARNRVIALS YELLGLISFL TAGPDEVRAW TIRRGTPAVE
AAGVIHSDIQ RGFIRAEVVA FDDLARAGSM VEARKHGHVR MEGKQYIVQD GDVCHFLFNI
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