| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1645 |
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| Symbol | |
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| ID | 5539121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2123493 |
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| End bp | 2126213 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893782 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001431755 |
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| Protein GI | 156741626 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.884619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.02986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATCACT GTGCAATCTT TTCACACCCT ATGCTGACTC GCCGGTCTTT TCGTTTGACG
ATACGCTCCA AAATGACATT GGTGGCGCTT GTGCTTGCGC TAGCGCCACT GATCTTCGTG
AGTGCGCTCA GTCTTTCGGC GCTCGACCGC GCCCGCGGCA TTGCAGTGCA AACCGCGTCG
GATGCCCTGC GCAAGCAAAC CGAAGAAGAC CTCGCGCGCT GGGTGACCGA CAAGGCGAAC
CTCTACGACG CCAAACTGGA GCGCGTCTAT CAACAAGTTG AAACGATCGT CAGCTACCAA
CCGTTAACGG GCGGCGGGGC GGATGCAAAC ACCGTCTCTG AACGTGTCTG GGTTGCGCCG
GACGGTCCGA CGCCCGCAGC GCTACGCAAA CATGCCGATA CCATCGCACT CGCCCGTCGG
TATATCCCGC TCCTGCGCGC ATCGGTCGAT CAGGAAGGGA TGGTGAGCCT GGCATATGTG
GCTTTTGAAG ATGGCGGCGT GCTCGCTTTC GATCACGACA TCACCGATGT GCTGGACGCC
ATCAAGCCGT TCGATCCGCG CAAGCGCAGC TGGTACATCG CTGCTCGTGA GGCGGGCAAG
CCGGTATGGG TCGATACCTA TGTCGATGCC AATACCAAGA AACTGACGAC GACCTGCGCT
GCGCCGCTTT ACGACCGGAA TGGCGCATTT GCCGGCGTTG TCGGGTTCGA TGTCTTACTG
GAGACCATCC AGGAGGATAT CCTGGCGATC GATATTCCTC CCGGCGGATC GGCGTTCCTG
ATCAATCAGC GGGGCGATGT GCTACTGCAC AACACACTGC TGAGCCGTCA GGGTCAATGG
GATCAACCGA TTGCAACCGA CAATCTCTTG AACGACGCCA ATCCGCAGGT GCGCACCATT
GCCGGGCGCA TGACGCGCGC GGAACAGGGG GTCGAACGCC TGACGCTTCA GGGTGAAGAG
GTGTATCTGG CGTTTGCGCC GATCTCCAGC GCAGAATGGA GCGTCGGCAT CGTCATTCCC
GTAGCCGAAG TCACTGGTCT GGCGCAGCAG GTGAGTGAAG TCATTTCTCT TCGCCAGGAA
GTGCTCAGCG GGCAGATCGT CCTTGTCATC ATTCTGTGCG TGATTGTCGT CTCGGTGCTG
AGCATGCCTG CGGCGTCGAT CCTGACGCGC CCCCTGCGCG AGTTGCAGGC GGCAGCACAG
CGGGTCGCCG CCGGCGATCT GACGTATCGC GTCCCCGAGG CGGGTGATTA TGAAATCGCA
CATGTCGGGC ATTCGTTCAA TACTATGACC GACGCGCTCC ACGAGAAGAT CAACGAACTG
GAATTGAACC TGCGTCAACT GGCAGCATTG AACGAGATGT CGAATCAGTT TCGCACCATT
GGGTCGGTGC GCGAACAACT CGACGCCATT CCCAAGGGGG TATGCGCGTG CCTGGGGTTT
GAACGCGCCG TGCTCTACCT GATCGAACAA CGCCATCTCC GTGCAGTGAG CGCCTGGATC
AACACAGGCG ATGCGGATCA GATCGCTCGT CTGCTGGCGG ATGCCGCGTC AATTCCGCTG
GAAAGCGATA CGATGTCGGC AGATGTGGTG CGGAGCGGGC AGGCAGTGAT TATCAGCGAC
GTGGCGCCGC ACAGCGCACC GGCCAATGCT GTGCAGGCGC CGCTGTTCGG ACGCGAGAAA
CGGGTGATTG GCTTGCTCGT CGCCTCCTTC GATGCCGCAG GGCGCGCGCC GACGCCACGC
GACGCTGCGC AGTTGATGAC CTTCGCCGGT ATGTCTGGTC TGGCGCTCGA AAATACGATG
CTCTACGCTG GCCTCGAACG TCAGGTGGCG CAGCGCACAG CAGAATTGCG GGCCGCTCTG
GCGCGCGCGC AGGAGGCCGA TCGTCTGAAG GGTCAATTCC TGGCAGCAGT ATCGCACGAA
CTTCGCACGC CGCTCAATGC CATCATCGGG TTTTCGACCG TCATGCTCGA TGAGATCGAT
GGTCCGATCA CGCCGTTGCA GCGTGAGGAC CTGAAGATTA TCAATCGGAA TGGTCGCTTC
CTGCTGCACC TGATCGATGA GTTGCTCGAT CTGGCGCGGA TCGAAGCCGG AAAAATCGAC
CTGGAACTTG CGCCCCTCGA TATGCGCGCC TTGATCGTCG AGGTGACGGA AACGGTGCAG
GGACTGCTGC ACAACCGGCA GATCGCGCTC AATCTTTTGT TGCCTGAGCG TCTGCCATAT
GCCTGTGGCG ACGCCGCCAG AATCCGCCAG GTGCTCCTCA ATTTGCTCTC AAATGCGGTG
AAGTTCACGC CACAAGGGAG CATCACGGTA AGCGCTCGCT GTGTGGCCGC GCCCGAGAAT
CATCCGGGAG CAACGGGTTC GGGCGCCGTC ATTGTGCGCA ATGGGCAGCG TCTGCATCCC
TACATCGCAG TCAGCGTCCG CGATACCGGC ATCGGCATTG CGGCAGAAGA CCTGACACGC
ATCTTCGAGG CGTTCAATCA GGTGCGCTCT GGCAACCGGC AGCATGGCAG CGGGTTAGGA
CTGGCGATCA GTCGCCGTCT GATCGAGGCG CACGGTGGGC GTATCTGGGT GGAAAGCGAA
CCTGGTAAGG GGAGCGTTTT CACATTTATC CTTCCATGCG CCATTGGAGT TCGCAGCGAT
CATACCCGCA ACGCCGGCGT TGCGGGTGAG CAGGCTGTCC AGCATGTCGA AGTGCAAACC
GCTCTTCTTG ATAATCGATG A
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| Protein sequence | MYHCAIFSHP MLTRRSFRLT IRSKMTLVAL VLALAPLIFV SALSLSALDR ARGIAVQTAS
DALRKQTEED LARWVTDKAN LYDAKLERVY QQVETIVSYQ PLTGGGADAN TVSERVWVAP
DGPTPAALRK HADTIALARR YIPLLRASVD QEGMVSLAYV AFEDGGVLAF DHDITDVLDA
IKPFDPRKRS WYIAAREAGK PVWVDTYVDA NTKKLTTTCA APLYDRNGAF AGVVGFDVLL
ETIQEDILAI DIPPGGSAFL INQRGDVLLH NTLLSRQGQW DQPIATDNLL NDANPQVRTI
AGRMTRAEQG VERLTLQGEE VYLAFAPISS AEWSVGIVIP VAEVTGLAQQ VSEVISLRQE
VLSGQIVLVI ILCVIVVSVL SMPAASILTR PLRELQAAAQ RVAAGDLTYR VPEAGDYEIA
HVGHSFNTMT DALHEKINEL ELNLRQLAAL NEMSNQFRTI GSVREQLDAI PKGVCACLGF
ERAVLYLIEQ RHLRAVSAWI NTGDADQIAR LLADAASIPL ESDTMSADVV RSGQAVIISD
VAPHSAPANA VQAPLFGREK RVIGLLVASF DAAGRAPTPR DAAQLMTFAG MSGLALENTM
LYAGLERQVA QRTAELRAAL ARAQEADRLK GQFLAAVSHE LRTPLNAIIG FSTVMLDEID
GPITPLQRED LKIINRNGRF LLHLIDELLD LARIEAGKID LELAPLDMRA LIVEVTETVQ
GLLHNRQIAL NLLLPERLPY ACGDAARIRQ VLLNLLSNAV KFTPQGSITV SARCVAAPEN
HPGATGSGAV IVRNGQRLHP YIAVSVRDTG IGIAAEDLTR IFEAFNQVRS GNRQHGSGLG
LAISRRLIEA HGGRIWVESE PGKGSVFTFI LPCAIGVRSD HTRNAGVAGE QAVQHVEVQT
ALLDNR
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