| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1633 |
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| Symbol | |
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| ID | 5539109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2110295 |
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| End bp | 2111335 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893770 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001431743 |
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| Protein GI | 156741614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00905932 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGATCA CGGGTAGTAT TGCGCGACCC TCGGCGGCGC GGATCCCTTG GGTGACGGTT
GGGGTGTGGG GTGGGCTGCT CCTCCTGGTT TTGATCGCCT ATGCGCGCGC GCCACAGGCG
ACGACCGCAG TGCTGACCTC GACGATCCGC CAGTCGACGC CAATTATCCT TGGGGCGCTG
GCGGGCATTA TGTGCGAACG CTCAGGTGTC ATTAACATCG GCATCGAGGG GATGATGCTG
CTCTCCGCGT TCCTCGGCTT TCTGTTCAAT GTGTGGACGG GCGACCTGTT CCTGGCGACA
GTGGGGGCGC TGCTTGTCGG TGCGGCGGTG GGCGCATTTC ATGCGTTGAT GTCGATAACG
CTCAAGGTCG ATCAGATTAT TGCCGGAACG GTCATCAATA TTCTTGCCGT GGGTCTGACC
GGCTATTTCT ACCAGCAGGG TCTGACGACA CGCGGCAAGT TTTCGCCGGT GAGCATTCCG
GTGCTGGCGG ATATTCCGAT TATCGGTCCG GTGTTTTTCA GCAACCCGCC GATCACCTAC
GCTTCGCTGA TCCTGATCGT CGTCATTCAT GTGCTCCTGT TTCGCACCGC CTGGGGGCTG
CGCACGCGCG CCGTCGGCGA ACATCCCGCC GCTGCCGATA CCGTCGGTGT TGCGGTCAAT
CGGGTGCGCT ACATAAACGT TATTGTCGGT GGCATGCTCG CCGGGCTGGC AGGCGCGTTC
CTGACGCTCG AATCGGTCGG TTCGTTCGAG CGGAATATGA CCAACGGGCG CGGCTTCGTG
TCGCTGGCGG TGATGATTTT CGGCAAATGG ACGCCGTTTG GCGCGTGGGG CGGGTCGCTG
CTGTTCGGTT TTGCCAATGC GATGCAATCA CAGATTCAGT TCCTCAAGAA TCAACTCCCA
TCCTGGTTGG CGTGGATCGG CGATCTGCCG CCGCAGTTTA TCGGGATGTT GCCGTATGTG
TTGACCATCG CCGTGCTGGC CGGCTTCGTC GGGCGCGCCC GCCCGCCTGC CGCAATTGGG
AAGGTGTACG AGAAGGAATG A
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| Protein sequence | MQITGSIARP SAARIPWVTV GVWGGLLLLV LIAYARAPQA TTAVLTSTIR QSTPIILGAL
AGIMCERSGV INIGIEGMML LSAFLGFLFN VWTGDLFLAT VGALLVGAAV GAFHALMSIT
LKVDQIIAGT VINILAVGLT GYFYQQGLTT RGKFSPVSIP VLADIPIIGP VFFSNPPITY
ASLILIVVIH VLLFRTAWGL RTRAVGEHPA AADTVGVAVN RVRYINVIVG GMLAGLAGAF
LTLESVGSFE RNMTNGRGFV SLAVMIFGKW TPFGAWGGSL LFGFANAMQS QIQFLKNQLP
SWLAWIGDLP PQFIGMLPYV LTIAVLAGFV GRARPPAAIG KVYEKE
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