| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1632 |
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| Symbol | |
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| ID | 5539108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2109168 |
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| End bp | 2110283 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893769 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001431742 |
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| Protein GI | 156741613 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0105884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCG CTGAATCGCA ATCTTCTCCG CAGGCGGATC GTCTGGCGCC ACTGCGCGGT
CTGCTGCGCG CCATGATTGT GCCGGTTATT TCAGTCGTGG TGGCGCTGGC GATTGGCGCG
GTGATCATCT CGGTCTCCGG GGCGAACCCG CTGGTGGCGT ATCGTGCTCT GTTCGAGGGA
GGGTTGGGGA GCGCGCGGGC AATCGGGCGC ACATTCGAAA AGGCAACGCC GCTGATCTTT
GGCGGTCTGG CAGTATCGCT GGCGTTCAAG TGCGGGTTGT TCAATATCGG CGCGCAGGGT
CAGTTGTTGC TCGGCGCCGT GTTTGCAGCG TTTATTGGCT TCAGCCTGCA AGGACTGCCC
GCCATGGCGC ATATTCCGCT GGCGCTGCTG GTTGGGGCGA TCATGGGCGC GCTGTGGGCA
GCGATTGCCG GTACGCTTAA GGCGTTCACC GGGGCGCATG AAGTCATCAC GACGATCATG
CTCAATTTCG TCGCTTTCAA CCTCACCGAC TGGTTAGCGG ACGGACCCTG GAAGGATCGC
TCGCCGGGGA ATATTGTGGC GCGCACGCCT GCCGTGGCGC CCGAAGCACG CCTGCCCGAC
ATCGCCGGCG TACCACTCGG GATGATCCTG GCGGTGCTGA TGGCGATTGC CGTCTGGTGG
TTGATCTGGC GCACAACAAT CGGGTTCGAG TTGCGCACCG TCGGGCAGAA TGCGAGTGCG
GCAAAGTATG CTGGTATCTC GGTGCGTCGC ATGACCGTGC TGGCAATGGT CGCTAGCGGC
TTCCTGGCGG GGCTTGGCGG GGCGATCGAG ACGCTTGGCG TCGTCGGGCG GTTTCAGCCG
GGATTCAATG CCGGTCTTGG CTTTCAAGCG ATCACCATTG CGCTGCTGGC GCGCACTCAT
CCAATCGCAG TCGTTCCGGC GTCGCTCCTG ATCGGCGTCA TGCAGGCGGG CGCCAGTCGT
ATGCAATTCA ATTCGGGCGT GGCCTCCGAA ATTGTCGATG TCATTCAGGC GATCATCCTC
TTCTTTGTCG CTGCCGAGAG CCTTATTCGC TGGGTGCTGC GCCTTCGCGC CGAAGAGGGT
GAACGGGTGA CCCTGAGCAG TGGTTGGGGT TCGTAG
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| Protein sequence | MERAESQSSP QADRLAPLRG LLRAMIVPVI SVVVALAIGA VIISVSGANP LVAYRALFEG
GLGSARAIGR TFEKATPLIF GGLAVSLAFK CGLFNIGAQG QLLLGAVFAA FIGFSLQGLP
AMAHIPLALL VGAIMGALWA AIAGTLKAFT GAHEVITTIM LNFVAFNLTD WLADGPWKDR
SPGNIVARTP AVAPEARLPD IAGVPLGMIL AVLMAIAVWW LIWRTTIGFE LRTVGQNASA
AKYAGISVRR MTVLAMVASG FLAGLGGAIE TLGVVGRFQP GFNAGLGFQA ITIALLARTH
PIAVVPASLL IGVMQAGASR MQFNSGVASE IVDVIQAIIL FFVAAESLIR WVLRLRAEEG
ERVTLSSGWG S
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