Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1608 |
Symbol | |
ID | 5539084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2073863 |
End bp | 2077702 |
Gene Length | 3840 bp |
Protein Length | 1279 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893745 |
Product | hypothetical protein |
Protein accession | YP_001431718 |
Protein GI | 156741589 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC CCGACCGTCG TTTCATCGAA GAAACCTTTC CCGTCAAAGA AGTCAGCCAA CATTCCGCCA AAGAAAAGAA CATCCGCCAC GGGCACATCA GCACGCTGCA CATCTGGTGG GCGCGCCGAC CGCTGGCGGC CAGCCGCGCC ACTGCCTACG CCGCCCTGGT GCCGTCGCCA GAAGACATCC TGGACTGGCA AAAGCAGCGT AACTTTCTCG TCGAGTTGAG CAAGTGGGAG AATTCGCTCA ACCCGCACCT GCTGGAGCGC GCCCGCCACG CCATCTACGC CGCCCACGCC GAACGTCTGA GCGCCGAACT GGGCGTGCCG GTGACCGCCG CGGACATCGA AAGCGGCAAA TACCCTCCGC CGCGCGTGCT GGACCCGTTC TCCGGCGGCG GTTCGTACCC GTTGGAAGCC CTGCGCCTGG GTTGCGAGGC ATACGCCAAC GACTACAACC CGGTGGCGGT GCTCATCCTC AAGGCCACCC TGGAATACCC GCAACAGTAC GGCCGCCCCT TCGCCGGTAT GCCGGAGCAC TTGTGGCGCA AGAAATCATC CCGGCAGAAA GCCCCCGCCG GGCAAATGGC TTTCGGCTGG AACGAACCCG CTCCGGCCGA TGCTCCACCC GCTGATTTCA ACCCGCTGCT GACGGCAGTG AAGTATTGGG GCAACTGGGT GCTGAAACAA GCCCGCAAGG AACTGGCGGC GTTTTACACC CCCACCCCCG GCCCCTCCCC CATCGAGGGG GAGGGGAGGC TTGCCCCCGG ACCCTCCCTC ATCGAGGGGG AGGGGAGGCT TGCCCCAACC CCCGGACCCT CCCTCATCGA GGGGGAGGGG AGGCTTGCCC CCACCCCCAG CCCCTCCCCC ATTGAGGGGG AGGGGAGGCT TGCCCCCATC GAGGGAGAGG AGACAGTGCG CTGGGACGTT CCCGAAAGTC TGCGGCGCAA GATGGTGGAA GTGGCCCGCG AATTCCGCAA AAACCCGACT CCCAGTGAAG CCATTCTCTG GCAGGCGCTG CGCGGGAAGC AATTGGACGG CGTCAAGTTT CGCCGTCAAC AGCCGATAGG CCCCTTCGTG GTGGATTTCT TCGCCCCTTC CCACCGCCTG ATTGTAGAAG TGGACGGCCC AATTCACGAA AGCCAGAAAA CTGCCGATGC AGAGCGTCAG CGGCTGCTCG AATCGCTTGG ATTGCGTTTC CTGCGGCTAC CTGCCAGCCT GGTCGAACAA AATCTCCCTG CGGCGCTGGA AGAGGTACAC CGAGCGTTGC ATGCTTACCC CCACCCCCGG CCCCTCCCCC TTCATGGGGG AGGGGGGCGT TATACCCAGC CTCTTCCCCA TGAAGGGGGA GGGGGGCGTT ATGCCCAGCC CCTTCCCCAT AAAGGAGGAG GGGGGCAGAT TCCCCCCTCT CCCCTTGTGG GAGAGGGGGG CAGGGGGGTG AGGGGTGAGT GCCAAACCCC CGTCGGCTAC ATCTGGGCGC GCACCCTGCC CTGCCAGAAT CCGGCCTGCG GCGTGGAGAT CCCGCTCATG CGCCAGTTCT GGCTGGCCAA GAAAGGCAAA AAAGAAATCG CCCTCCGGCC GGTGACGCGC GGCCCCGGCC GGCCGATTGA CTTTGAAATC GTCGCCCGTG GCGCGCAGAT TCGCCGCAAC GAGGGCTATC AGCCCTGGCC GGTGGAAGAT TTCGATCCGA CCAAAGGCAC GGTCAAAGGC GCCGTGGTCA CCTGCCCGGC CTGCGGCGCG ACCATAGACG CCAAAACCAC CCGCCGCCTC TTTCAGCAAG GCAAAGCCGG GCAACGCATG GTGGCGGTGG TGTATACCCC CACCCCCGTC CCCTCCCCCA TTGAGGGGAA GGGGAGTCTC ACCCCCACCC CCGGCCCCTC CCCCATTGAG GGGGAGGGGA GTCTCACCCC CACCCCCGGC CCCTCCCCCA TCGAGGGGAA GGGAAGTCTC ACCCCCACCC CCGGCCCCTC CCCCATCGAG GGGAAGGGAA GTCTCACCCC CACCCCCGGC CCCTCCCCCA TGAAGGGGGA GGGGAGGCTC ACCCCCTCTC CCTTTATGGG AGAGGGGGGC AGGGGGGTGA GGGGCAAATC CTACCGCCTG CCCACCGCCG CCGACCTGGC CGCCTACCGC GCTGCCGAAG CCGCCCTGCA GGAAAAACGC GAACAACTGC GCGCCGCCTG GGGCGTGGAG CCGGTGCCGG ATGAGCCATT GCCACCACAA GGGACGCTGG GCTTTCGCGT GCAAGGGTAT GGCATTAAAA CCTGGGGCAA CCTGTTCAAC CCGCGCCAGG CGCTGGCCCT GCTGACCTTC GCCGATGCCG TCCGCCGCGC CCACGCCGAA ATGCTGGCGC GCGGCTACCC GGATGATTTT GCCAGGGCCG TGGCGACGTA TTTATCCATC GTATTTAATC GCTTGGCAGA TAAAAATGCC AACCTTGTTG TATACAATGT CGTTGGAGAG AAAATAGAGC ATGTCTTTGG AAGACAGGCA CTGCCCATGG TATGGGATTA CGTTGAAGTC AATCCATTTA CTGATGTGGG CTGGCCAAAT ATGATGGATT GGGTCATTCG CATTATTGAC CACCTGGGTC AAATCCCTAA TCCGCAATCG TCAATCGTCA ATTGTCAATC GTCTGTCACC CACGCCTCCG CTACGCGCCT GCCCTATCCC GACGGCTTTT TCGACGCCGT GCTGACCGAC CCGCCCTACT ACGACAACGT GCCCTATTCC TATCTTTCGG ATTTCTTCTA CGTCTGGCTC AAGCGCACCG TCGGCCCTCT CTACCCCGAC CTGTTCTCCA CGCCGCTCAC GCCCAAAGCG GGCGAAATCG TGGCTTACTC GCACGGCGAA GGCGGGCTGG AAGCGGGCAT GCGCTTCTTC GAGGAGCAAC TTGCCCTGGC CTTCCGCGAA ATCCAGCGCG TGCTCAAGCC GGGGGGTGTG GCGGTCATCG TCTATGCCCA CAAGTCCACC GCCGGCTGGG AAACGGTCAT CAACGCCCTG CTGGATAGCG GCCTGGTGGT CGGCGCCGCC TGGCCGCTGA ATACCGAGAT GCAATCCCGC CTGCGTGCCA GTGACTCGGC TGCGCTGGCT TCGTCCATCT ATATCGTGGC GCGCAAGGCC GAACGGCGCG GCGTGGGCTT CTACCCCCAG GTGCGCCGCG AACTGGAAAC GCACCTGAAT GCCAAACTGC AGCGCCTGTG GGAGGAGGGC ATCGGCGGGG CCGATTTCTT CATCGCCGCC ATCGGCTCGG GCATTGAGGT CTTTGGCCAA TACGAGCAGG TGATGGACAT GGAAGGCAAC CTCATCCGCG CCGAGCGCCT GTTGGACGAG GTGCGCACCC TGGCCACCGA TTACGCCGTG CACCAGATTT TGCACAACGG CTTCGCCGCC GAGGTCAGCG AGTGCACACG GCTGTATGTG CTGTGGCGCT GGAACTATGG CGAGGCGCGC GTGCCCTTTG ATGAGGCCCG CAAACTGGCG CAATCCTGCG GCCTGGACCT GAGCGAGGAG TGGTCGCGGC GCGGCTCGTT CGTCAAAAAA GAGCAGGAAT TCGTGCGCCT GCTGGGACCG CATCAGCGCG AGATGGAGCA CCTGGCCGCC GGGCGCGAAT TGATTGACGT GCTGCATCAC GCCCTGCGCC TGTGGGAAAA AAGCGACCGG TCGGCGCTGG TGCAGCGCCT GTCCGAGAGC GGATTCGGCC AGAGCGAAGC CTTCTACCGC GTGGCGCAGG CCGTCTCCGA GAGTTTGCCT ATCGAGAGCA GAGAGAAGAA ACTGCTCGAT GGCCTGCTCA CCGGCCGCGA ACGCCTGCGC GAGGAGGTCA GACAGGCGAG GTTGTTGTGA
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Protein sequence | MTHPDRRFIE ETFPVKEVSQ HSAKEKNIRH GHISTLHIWW ARRPLAASRA TAYAALVPSP EDILDWQKQR NFLVELSKWE NSLNPHLLER ARHAIYAAHA ERLSAELGVP VTAADIESGK YPPPRVLDPF SGGGSYPLEA LRLGCEAYAN DYNPVAVLIL KATLEYPQQY GRPFAGMPEH LWRKKSSRQK APAGQMAFGW NEPAPADAPP ADFNPLLTAV KYWGNWVLKQ ARKELAAFYT PTPGPSPIEG EGRLAPGPSL IEGEGRLAPT PGPSLIEGEG RLAPTPSPSP IEGEGRLAPI EGEETVRWDV PESLRRKMVE VAREFRKNPT PSEAILWQAL RGKQLDGVKF RRQQPIGPFV VDFFAPSHRL IVEVDGPIHE SQKTADAERQ RLLESLGLRF LRLPASLVEQ NLPAALEEVH RALHAYPHPR PLPLHGGGGR YTQPLPHEGG GGRYAQPLPH KGGGGQIPPS PLVGEGGRGV RGECQTPVGY IWARTLPCQN PACGVEIPLM RQFWLAKKGK KEIALRPVTR GPGRPIDFEI VARGAQIRRN EGYQPWPVED FDPTKGTVKG AVVTCPACGA TIDAKTTRRL FQQGKAGQRM VAVVYTPTPV PSPIEGKGSL TPTPGPSPIE GEGSLTPTPG PSPIEGKGSL TPTPGPSPIE GKGSLTPTPG PSPMKGEGRL TPSPFMGEGG RGVRGKSYRL PTAADLAAYR AAEAALQEKR EQLRAAWGVE PVPDEPLPPQ GTLGFRVQGY GIKTWGNLFN PRQALALLTF ADAVRRAHAE MLARGYPDDF ARAVATYLSI VFNRLADKNA NLVVYNVVGE KIEHVFGRQA LPMVWDYVEV NPFTDVGWPN MMDWVIRIID HLGQIPNPQS SIVNCQSSVT HASATRLPYP DGFFDAVLTD PPYYDNVPYS YLSDFFYVWL KRTVGPLYPD LFSTPLTPKA GEIVAYSHGE GGLEAGMRFF EEQLALAFRE IQRVLKPGGV AVIVYAHKST AGWETVINAL LDSGLVVGAA WPLNTEMQSR LRASDSAALA SSIYIVARKA ERRGVGFYPQ VRRELETHLN AKLQRLWEEG IGGADFFIAA IGSGIEVFGQ YEQVMDMEGN LIRAERLLDE VRTLATDYAV HQILHNGFAA EVSECTRLYV LWRWNYGEAR VPFDEARKLA QSCGLDLSEE WSRRGSFVKK EQEFVRLLGP HQREMEHLAA GRELIDVLHH ALRLWEKSDR SALVQRLSES GFGQSEAFYR VAQAVSESLP IESREKKLLD GLLTGRERLR EEVRQARLL
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