| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1607 |
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| Symbol | |
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| ID | 5539083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2071069 |
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| End bp | 2073798 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893744 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001431717 |
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| Protein GI | 156741588 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA AGAGCCTTTA TCACGGGGCG CGTTGGATAC GTTGCGATTT GCATCTCCAT
TCGCCCGGCG CGCATGGGTT CACCTTTCCG CCAGGACTGA GCGCCGCTCA GCGCGATGAG
GTCGTGGCGC AGTATGTGCA GCAGCTCCAG GCTCAAGGCA TCGCAATCGC CGCCATCACC
GACTACCAGC AGATCCGAAC CAAGTGGTTT ATCCCGATTC AGCAGGAAGC AAAAAAGGCG
GGGATTTACG TCTATCCAGG CGTGGAGCTT TCTTTTGGTG GGAGCGTGGC CGGCAAGTAT
GGGCTGCATG TCCTGGCGAT CTTCCCTTAC GATAGCGACC TTCAGGAAAT CAATCGCAGG
ATTGATAAGT TGTTAGACGG GGATGTCCAG GAAGAGTTGG TCAGGGAGAA CGGTAGCCAT
CGCGATCTAA AGCCGAGAGA AAATTTGGCA GATTGTCTGA TCCGCTTGCG CCGGGAAACG
GGCTGTCTAT TGGTCTTTGC CCATCCCAAT GATGAGAATG GTTTGTGGAA GACCTATCAA
CCAGGCGAGG CCGCCGACCT TCTTGTCCGC GTGGAACCCG ACGCGATCGA ACAGTTTGAG
GAGAGAGATC GTCAGCGCCT GCAGGACACC GGTAAAGTTC ATCCAACGCT GCTTGGCCGC
ATCGCCTGCG TGCGCAGCAG CGACAATCAC AGCATCGCCG AGATTGGGAC AAAAACCCTT
TCGGAGGGTG CGCCGCGCGC CACCTATGTC AAGCTGAGCG TACTCGATGA CCTGCGGGCC
ATTCGTCTGG CATTGCACGA TCATGCCCTG TTAGTGCGGG TGGGCGAACC GCCGAAAGCA
GAGTATACTC ACTTTGTCCA CCTTGAAATC GAGGGAAATG GCTTTCTCGG CGGGCTGAGC
TTGGATTTCA GCCCAGAGAT GAATGTCTTG ATCGGCGGGC GTGGGGTTGG CAAGTCGGCG
TTGCTTGAGG TAATTCGCTA CGCGCTTGAT CTTCCGGCAT ACGCCCCTAC GGCGTATCGC
GAAGGGTTGG TGAAACACGC GCTGGGCAGC GGCGGCAAGG TTGTCCTGGC CTTCTACCAG
GTTGTGCGTC CCGGCATCGA GCGGCATTAT CGCATTGAGC GCGTCTGGGA CGAGCAGCCC
CGTGTTTTTG AAGGCGAACG ATCCGTATCC CTTTCCCCGC TCGAAGTTTT GGGTGAACGT
GAGGCGCCCC TCTTTTTCGG GCAGCGAGAG ATATACGAGG TCACCCAATC CGCCCGTCTG
CGCCGCCGTC TCCTGGATGA AATCATCGGT CGCACGGCGG AGATGCAATT GGGACAGGTT
AAAAGGATCA CGGAAGAGCT GCAGCGCAAT GCGCGCACTA TCCTGGAGCA TCAGGAACGC
CTGGCGCAAC GAAAAGACCT GGAAAAGCGC TTGCAAGAAA TTGAGCATCA GATAGCCCTT
TATCAACAAT ATGGCATTAC GCAAAAACTG CAACAGGCCA CAGCGTTGGC GCGCGATGAA
GAGCGCCTCA AGCGTGCCCA CGAGCAGCTC TCTCAGGCGC AGGCCGACTG GCAAGAGGTC
CAGCAACGCC TGGCTGAACA TTGGACAAAC GCGCTAGCAG GGTTGAAACA GGCCGATAGC
GTTCAGGCAG CGTTGCTTCA ACAGGCCGCC GAGGTGCTAC GTGGCTTGCA AGATGCGTTC
GATGGCTACT TGCAACAGGG CGAAGCGAGC TTTCAGCAGG CACGGGCCGA ATTCGACCGC
CTGCTGGCAC GTTGGGAGCA GGAACGTCGG CCACTCGATG AGGAGATCCA ACGCCTTAAA
CGAGAACTGG GGACCCAATC TCTGGACCCC GATGTCCTTA TCCGCCTGAC GCAAGAGCAG
GAAGCCCTGC GCCCTCAATG GGAAACGCTG AGGAAAATAG AGACCACCAC AGCCAACCTG
CAAGAGGAAC GGCGCGAGAA ACTGGCCGAC TTGCGCGAAC AACGCCGACA GGTATTTCAG
TTACGCCAGC AGCAGGCTCA AGTCATTTCG CAGGCGTTGA AAGATCGCGT GAGCGTGGTG
GTAGAATATC GTGGTCAGCG CCAAGAGTTC GCTGAAAGGC TAAGTGCCTT CTTCAGTGGC
TCTGGCCTGG ATAAAGAGAG CCTGCGTCGG TTGGCTGAGA AGGGTACCGA TGGCATAGCG
TTGGCCGAAT GGGTTCGACA GGGTGAAAAG GCCTTATGCC AGAACGCCGA CTTGACTTCC
GCGCGCGCCC AGCAAATGCT TCGCTTTCTC GAACAGAATC CGCAAAGGAT TTACGAGCTG
GAAGTGCTGG CGCCGGAAGA TGAGGTGGAG GTCCAACTCA AAGTGAATGA TCTCTGGCTT
CCGCTGGAGA AACTCTCAGC CGGACAGCGA GCAACCGCCA TGTTGCTCAT CCTGCTTACC
CAACACGACC GCCTCCTGCT GATTGACCAG CCGGAAGATG ACCTGGATAA CCGTTTCATT
TTCGACGATG TCGTGCCTTT GTTGCGCGAG CAAAAAGGAA AACGCCAGAT CATTGCGGCG
ACCCACAATC CCAATATCCC GGTATTGGGG CACGCTGAGC TGGTGGTCGC GCTGGAAGCC
CAGGAAGAAC ACGCTGCGGT AGCTATTCAG GGTGCCATTG ACCGAAAAAC GGTGCAGGAT
GTTGTGCGAC GGGTCATGGA AGGCGGTGAG GAAGCTTTCC GTCGCCGCGC CGAAAAGTAC
GGCCTGAACA TTCAGGGAGG AAGCGGCTAA
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| Protein sequence | MTEKSLYHGA RWIRCDLHLH SPGAHGFTFP PGLSAAQRDE VVAQYVQQLQ AQGIAIAAIT
DYQQIRTKWF IPIQQEAKKA GIYVYPGVEL SFGGSVAGKY GLHVLAIFPY DSDLQEINRR
IDKLLDGDVQ EELVRENGSH RDLKPRENLA DCLIRLRRET GCLLVFAHPN DENGLWKTYQ
PGEAADLLVR VEPDAIEQFE ERDRQRLQDT GKVHPTLLGR IACVRSSDNH SIAEIGTKTL
SEGAPRATYV KLSVLDDLRA IRLALHDHAL LVRVGEPPKA EYTHFVHLEI EGNGFLGGLS
LDFSPEMNVL IGGRGVGKSA LLEVIRYALD LPAYAPTAYR EGLVKHALGS GGKVVLAFYQ
VVRPGIERHY RIERVWDEQP RVFEGERSVS LSPLEVLGER EAPLFFGQRE IYEVTQSARL
RRRLLDEIIG RTAEMQLGQV KRITEELQRN ARTILEHQER LAQRKDLEKR LQEIEHQIAL
YQQYGITQKL QQATALARDE ERLKRAHEQL SQAQADWQEV QQRLAEHWTN ALAGLKQADS
VQAALLQQAA EVLRGLQDAF DGYLQQGEAS FQQARAEFDR LLARWEQERR PLDEEIQRLK
RELGTQSLDP DVLIRLTQEQ EALRPQWETL RKIETTTANL QEERREKLAD LREQRRQVFQ
LRQQQAQVIS QALKDRVSVV VEYRGQRQEF AERLSAFFSG SGLDKESLRR LAEKGTDGIA
LAEWVRQGEK ALCQNADLTS ARAQQMLRFL EQNPQRIYEL EVLAPEDEVE VQLKVNDLWL
PLEKLSAGQR ATAMLLILLT QHDRLLLIDQ PEDDLDNRFI FDDVVPLLRE QKGKRQIIAA
THNPNIPVLG HAELVVALEA QEEHAAVAIQ GAIDRKTVQD VVRRVMEGGE EAFRRRAEKY
GLNIQGGSG
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