| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1602 |
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| Symbol | |
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| ID | 5539078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2063058 |
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| End bp | 2066066 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640893739 |
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| Product | signal transduction protein |
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| Protein accession | YP_001431712 |
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| Protein GI | 156741583 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCAC CAAACGACTT GTTCACCAAC CTGGCCGCCT CGCTGGCCTA TGACCTGTTG
AAAGCGGGCG CTGCGCGGCT CACGACCTTT GTTTCGGGTT CGCCGGAGGA GCAGACCCTG
CGCCGTTGCT ACCAGAGCGC GTTTGCGGCC ATGCTGAGCG AGGTGACCGC CAGCCTGGAC
GACGCCCATC AGGAGCTGGT CGAGTACATT CTGCGCCAAT TTGTGATCCA ACCGCAGGTG
GCGGAGGGAT TGCTGGCCCT GGCGCTGAAG GGCGCCGACC TGCCCGACCT GCCCCGCCTG
CGTCAGCACT TTGACGCGTT GGGCTTCGAC CGCGCCACCC TGCCCGTGGA TTTTGACGTC
GCCCTGGCCG CCTTTACCCG CGGCCTGACG GAGGCACTGC TGGATGAGGC CGTTCGGCCG
GGGAGTCCGC TGTACAATCG CGTGAGCCTG GGCCGTGTCC TCGCCCTGCA CGCCCTGTTG
CAGCAGCAGG GCAAGACGCT GGAGGAGATT CGCGATGCGA TCCGGCGGCT GGATGCCCAC
GGCGGCGCCA CGTACAACGT CATCATTGCC CGGGCCACCG GTGTCGCCAT TGGCGATGGG
GCGCGCGTGG AAGCCGCTCT GCCCGCCGAC GTGCGCGACC TTTTGCAGCA GATCCTGCAG
GCGCTCAAGC CGCCGCCCGA CTACACCGAC GCCGACCTGC TGAACGCCTA TCTGGATTGG
CTGATCCGCC AGCACAGCAC CCTGGAACTG CGCGGCATCC ACCGGGCCGG GCCATCGCTG
GCCGTGCCTC TGGAACGGGT CTATGCGGCG CTCCAGGCCG AGACTGTCCC CCCGACCGAG
TGGCAGGAAA GTTACCGCCT GCTGGAAGAA GACCTGCAGG CCTGGCTGGA GCAGCAGGGC
CTGGACGATT TGGCCGAAGC GGAACGCCGC CGCTACCGCT GGCGCTTCCT GGCCGGGCAC
CCCCTCATGC CCGCCCTGGA GGAGCGGGAC CGCCCGCGCC TCTTCTCCGA CCGGAAGGCC
GAAACCCTCG ACCTGGCCCA AGCCGTGCGC CGCTTCCGCT GGCTGGTCAT CCTGGGCGAC
CCGGGCAGCG GCAAGACCAC CCTGCTGCGC TGGTTGACCC TGCACCTGGC CCGCGCCCTG
CGGGAGGGCG CCGACCGCGT CCGCGTCCCC GCGATGCACG TGGACGCCGA AGCAGACGAA
GACGCGCCGC CCGTAGACCT GGGCCCGGCC CGCCTGCCCG TGTTGGTGCG CATCGGCGAC
TATGCCGAAG CCCGCCGCGC GACCCAAGCC CGCAGCGAGC CGCCCCCCTC CTTGCTGGAA
TTCCTGGGGC ATCATGGCTG GCAGAGGGAT TTCCCCACCT TTGGCCGGGA ACACCTCCGC
CGGGGAGAGC GCCTGCCCGC GGACGGGTTG CGCCGCCTCA TCCGCGACTT TTTCCGCCGC
GGCCAGGCCA TGCTGCTGTT GGACAGCCTG GACGAGATCA CTGCGGCCGA CGACCGCCGC
GAGATCATCG GGGCGGTTGA ATCTTTTCTG CAAGAATGGA TCACCGACCC GGGCGGCCGC
TCCCCCCTGG ACCCGGGCGC ACTGCCCTGG CGCGACGCAG GAGCCCTCTC TCCGGACGAA
AGCGGCGGCA ACCAGATTAT CATCACCAGC CGCATCGCCG GCTACCACGC TGCGCCCCTC
AGCCTCCACC TGACCCACGC CACCCTGCAG CCGATGAGCG ACGCGGCCGT GGACCGCTTC
TGCCAGACCT GGACGCTGGC CGTCCACCGC CTGCTGGCCG ACCCGGGCGA CAGCGAGGAA
GAGGTGGCCC GCCGCGCCGC AGACGAGGCG CAGGCCCTGC AGGCTGCCCT GCACGACCCT
ACCCGCCCCG GCCTGCGCGA ACTGGCCGGC AACCCCCTGC TGCTGACCAT CCTGGCCATG
GTGCATCACA ACAGCCAGGC CCGCCTGCCG GAACAGCGCG TCCGCCTCTA CCAGATCGCC
GTGGAGAACC TGGTGGAGGT CTGGCGGGAT ACCGGCCTCA GCGAGGATGA GGTCGTCCAG
GTGCTGGCCC CCCTGGCCGC GCACATCCAC GAGCGCTATC CCAGCGGCCT GATTGAGGAA
AACGAGTTGC GCGAGCAGGT GACCCACAGC CTGGCCGAGT ATCGCGGCGA GAACCCCGAC
CGCCCCTCGC CGGCCTTTCG GCGGGATGTG GAGGCCTTCC TGCGGGCGGT GCGGGAGCGG
GTGGGGCTGC TGTCCGCGCG GGGCGAAGCC GCCTACGGCT TCCTTCACCT GACCTTCCAG
GAGTACCTGG CGGCCCGCCA CCTGGCCGGG GACCCCAACG CCGCCCTGGA GGCCATCCTG
GCCCGCCGCG ACGACCCGCG CTGGCGCGAG CCGGTCCTCC TGGCCCTGGG CTATCTTTCC
TGGAGCCAGA ACATGGCCGC CCGCGGCCGC CTGCTGCGGG CCTTCCTGGA GGCCGACGAC
CCCCTGGGTG ACCTGCTGCC CCGCAGCGCC CTGCTGATGG CTGCGGCCAT CCCCGAGATG
ACCAGGACGC CCCCTGCCAT CGTGGAGGAG GTAGCCCGCC GCCTGCTTCA GGCCTGCGCC
GCCCGGCCAG TCGCCTGGCT GCGCCGGGAG GTGAGCGCCG CTCTTGCCCG CCTCCACCGC
AGGGAGGAGG CGTCTCTGCT GGTGGAACGC GCCCTGGTCG AGGCCCTGAC CGCGCCGCCG
CCCCCCGACG CGGCCGACCC GGGCCCGGCC GCAGCGGACC TGATCCGTGA ACACAAGTGG
TTCACCCCCG ACCTGGCCGA GGCCCTGGTG GAGGCCCTGC CCCGCGATCT GCCGGGAGGA
CTGGCCCATC CACCGCGCCC TGCTGGACCT GGCGCAACAG GCTCCCCGGG CCCTGCCCGC
CGACCGCCTG CCCTTCCGCC TCGCCCTGCT GGCCGACCCC GCCCTGGCCG CACGGGTGGC
CGGAGACCCC GACTGGCTGC GCCTGACCCT GGCCCTCTAC GGCGGACTGG ACGCGAAGGG
CTGCTTTGA
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| Protein sequence | MISPNDLFTN LAASLAYDLL KAGAARLTTF VSGSPEEQTL RRCYQSAFAA MLSEVTASLD
DAHQELVEYI LRQFVIQPQV AEGLLALALK GADLPDLPRL RQHFDALGFD RATLPVDFDV
ALAAFTRGLT EALLDEAVRP GSPLYNRVSL GRVLALHALL QQQGKTLEEI RDAIRRLDAH
GGATYNVIIA RATGVAIGDG ARVEAALPAD VRDLLQQILQ ALKPPPDYTD ADLLNAYLDW
LIRQHSTLEL RGIHRAGPSL AVPLERVYAA LQAETVPPTE WQESYRLLEE DLQAWLEQQG
LDDLAEAERR RYRWRFLAGH PLMPALEERD RPRLFSDRKA ETLDLAQAVR RFRWLVILGD
PGSGKTTLLR WLTLHLARAL REGADRVRVP AMHVDAEADE DAPPVDLGPA RLPVLVRIGD
YAEARRATQA RSEPPPSLLE FLGHHGWQRD FPTFGREHLR RGERLPADGL RRLIRDFFRR
GQAMLLLDSL DEITAADDRR EIIGAVESFL QEWITDPGGR SPLDPGALPW RDAGALSPDE
SGGNQIIITS RIAGYHAAPL SLHLTHATLQ PMSDAAVDRF CQTWTLAVHR LLADPGDSEE
EVARRAADEA QALQAALHDP TRPGLRELAG NPLLLTILAM VHHNSQARLP EQRVRLYQIA
VENLVEVWRD TGLSEDEVVQ VLAPLAAHIH ERYPSGLIEE NELREQVTHS LAEYRGENPD
RPSPAFRRDV EAFLRAVRER VGLLSARGEA AYGFLHLTFQ EYLAARHLAG DPNAALEAIL
ARRDDPRWRE PVLLALGYLS WSQNMAARGR LLRAFLEADD PLGDLLPRSA LLMAAAIPEM
TRTPPAIVEE VARRLLQACA ARPVAWLRRE VSAALARLHR REEASLLVER ALVEALTAPP
PPDAADPGPA AADLIREHKW FTPDLAEALV EALPRDLPGG LAHPPRPAGP GATGSPGPAR
RPPALPPRPA GRPRPGRTGG RRPRLAAPDP GPLRRTGREG LL
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