Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1584 |
Symbol | |
ID | 5539060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2033814 |
End bp | 2035397 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893722 |
Product | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
Protein accession | YP_001431695 |
Protein GI | 156741566 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC TGATGATCCA GCCCAACTAC CACGCAGGTG GGGCGGAAAT TGCCGGCAAC TGGCCGCCAA GCTGGGTGGC GTATATCGGC GGGGCGTTGC GCAAGGCTGG CTATCCGAAC CTTCGTTTTG TCGATGCGAT GACCAATAAT TTGCCCGACA GGACGGTCGA GCAGATCATT CGCGCGAATC GCCCTGATGT CGTGATGGCG ACGGCGATCA CGCCGATGAT CTACAAGGCG CAGGAAACGC TGCGCCTGGC GCGCGAAGCC AATCCTGGCT GCAAGACCAT TCTCGGCGGG GTGCATCCAA CGTTCATGTA TGCGCAAGTG CTCACCGAAG CTCCCTGGAT CGATTACATC GTGCGCGGTG AAGGGGAAGA GATTATCGTC AACCTGATGC GCGCCATCGA GAACGGCAGC GATGAGCGCG ATCGCTATCA GATCCAGGGG ATTGCTTTCC TGGACGGTGA CCGCGTGGTT GCGACGCCTG CCCATCCGCC GATTGCCGAT CTCTCGACTC TTACGCCCGA CTGGAGCCTG CTGGAGTGGG AGAAGTACAT CTACATTCCG TTGAATGTGC GCGTGGCAGT GCCGAATTTT GCGCGCGGAT GTCCGTTCAC CTGCCGCTTC TGCTCACAGT GGAAGTTCTG GCGCAAGTAT CGCGTGCGTG ATCCGATCGC ATTTGTTGAT GAGATCGAAC TGCTGGTGCG CGAGTACAAG GTTGGCTTCT TTATTCTTGC GGATGAAGAA CCGACCATCC ATCGCAAGAA GTTTGTGGCG ATGTGCGAAG AACTGGAGCG GCGCAAACTC GGCATTCACT GGGGTATCAA CACGCGTGTG ACCGACATTC TGCGCGATGA GCAGTATCTG CCGCTCTACC GTCGCGCCGG GCTGGTGCAT GTCTCGCTCG GCACCGAAGC CGCCGCACAG ATGAACCTCG ACCGCTTCCG CAAGGAGACG ACCATCGAGC AGAATAAGCG CGCCATCAAA TTGCTGCACG ACCAGGGGAT CGTCGCCGAA GCGCAGTTCA TTATGGGGCT GGAGAACGAG ACGCCCGAAA CAATTGAAGA GACCTACCGC TATGCGCTCG ACTGGAAGGC GGACATGGCG AACTGGAATA TGTACACGCC GTGGCCCTTC GCCGAGTTGT TCGAGGAGTT GGGTGATCGG GTCGAGGTGC GTGATTTTTC GAAGTACAAC TTCGTCACGC CGATCATCCA GCCGGATGCG ATGACGCGCG AGCAGGTGCT GAAAGGAGTG CTGCGCAATT ATGCGCGCTT CTATATGCGT AAGGCGTTCC TGAGTTATCC CTGGATCAGG GATCCGTTCA AGCGGCGCTA TATGCTCGGC TGTCTGAAGG CGTTCGCCAA GACGACGTTT ACCAAGCGGT TCTACGATCT CGAACGGGTG CATCTCGACG GTTCCATCGA CCTGGGATTC GATGAGACAA AGGTGCTGAC GCGCGAGCAG ATTGCGGAGT TGAAGCAGAA GCGTCCCGAA CTCTCGGCAG ATGTCGATTT CCGTGGCACC GTCACTGCCT GCGGCGCGCC GAAAGATGCG CCGGAGTACG TTGAGCAGGA GTGA
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Protein sequence | MRILMIQPNY HAGGAEIAGN WPPSWVAYIG GALRKAGYPN LRFVDAMTNN LPDRTVEQII RANRPDVVMA TAITPMIYKA QETLRLAREA NPGCKTILGG VHPTFMYAQV LTEAPWIDYI VRGEGEEIIV NLMRAIENGS DERDRYQIQG IAFLDGDRVV ATPAHPPIAD LSTLTPDWSL LEWEKYIYIP LNVRVAVPNF ARGCPFTCRF CSQWKFWRKY RVRDPIAFVD EIELLVREYK VGFFILADEE PTIHRKKFVA MCEELERRKL GIHWGINTRV TDILRDEQYL PLYRRAGLVH VSLGTEAAAQ MNLDRFRKET TIEQNKRAIK LLHDQGIVAE AQFIMGLENE TPETIEETYR YALDWKADMA NWNMYTPWPF AELFEELGDR VEVRDFSKYN FVTPIIQPDA MTREQVLKGV LRNYARFYMR KAFLSYPWIR DPFKRRYMLG CLKAFAKTTF TKRFYDLERV HLDGSIDLGF DETKVLTREQ IAELKQKRPE LSADVDFRGT VTACGAPKDA PEYVEQE
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