Gene Rcas_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1584 
Symbol 
ID5539060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2033814 
End bp2035397 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content58% 
IMG OID640893722 
Productmagnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 
Protein accessionYP_001431695 
Protein GI156741566 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTC TGATGATCCA GCCCAACTAC CACGCAGGTG GGGCGGAAAT TGCCGGCAAC 
TGGCCGCCAA GCTGGGTGGC GTATATCGGC GGGGCGTTGC GCAAGGCTGG CTATCCGAAC
CTTCGTTTTG TCGATGCGAT GACCAATAAT TTGCCCGACA GGACGGTCGA GCAGATCATT
CGCGCGAATC GCCCTGATGT CGTGATGGCG ACGGCGATCA CGCCGATGAT CTACAAGGCG
CAGGAAACGC TGCGCCTGGC GCGCGAAGCC AATCCTGGCT GCAAGACCAT TCTCGGCGGG
GTGCATCCAA CGTTCATGTA TGCGCAAGTG CTCACCGAAG CTCCCTGGAT CGATTACATC
GTGCGCGGTG AAGGGGAAGA GATTATCGTC AACCTGATGC GCGCCATCGA GAACGGCAGC
GATGAGCGCG ATCGCTATCA GATCCAGGGG ATTGCTTTCC TGGACGGTGA CCGCGTGGTT
GCGACGCCTG CCCATCCGCC GATTGCCGAT CTCTCGACTC TTACGCCCGA CTGGAGCCTG
CTGGAGTGGG AGAAGTACAT CTACATTCCG TTGAATGTGC GCGTGGCAGT GCCGAATTTT
GCGCGCGGAT GTCCGTTCAC CTGCCGCTTC TGCTCACAGT GGAAGTTCTG GCGCAAGTAT
CGCGTGCGTG ATCCGATCGC ATTTGTTGAT GAGATCGAAC TGCTGGTGCG CGAGTACAAG
GTTGGCTTCT TTATTCTTGC GGATGAAGAA CCGACCATCC ATCGCAAGAA GTTTGTGGCG
ATGTGCGAAG AACTGGAGCG GCGCAAACTC GGCATTCACT GGGGTATCAA CACGCGTGTG
ACCGACATTC TGCGCGATGA GCAGTATCTG CCGCTCTACC GTCGCGCCGG GCTGGTGCAT
GTCTCGCTCG GCACCGAAGC CGCCGCACAG ATGAACCTCG ACCGCTTCCG CAAGGAGACG
ACCATCGAGC AGAATAAGCG CGCCATCAAA TTGCTGCACG ACCAGGGGAT CGTCGCCGAA
GCGCAGTTCA TTATGGGGCT GGAGAACGAG ACGCCCGAAA CAATTGAAGA GACCTACCGC
TATGCGCTCG ACTGGAAGGC GGACATGGCG AACTGGAATA TGTACACGCC GTGGCCCTTC
GCCGAGTTGT TCGAGGAGTT GGGTGATCGG GTCGAGGTGC GTGATTTTTC GAAGTACAAC
TTCGTCACGC CGATCATCCA GCCGGATGCG ATGACGCGCG AGCAGGTGCT GAAAGGAGTG
CTGCGCAATT ATGCGCGCTT CTATATGCGT AAGGCGTTCC TGAGTTATCC CTGGATCAGG
GATCCGTTCA AGCGGCGCTA TATGCTCGGC TGTCTGAAGG CGTTCGCCAA GACGACGTTT
ACCAAGCGGT TCTACGATCT CGAACGGGTG CATCTCGACG GTTCCATCGA CCTGGGATTC
GATGAGACAA AGGTGCTGAC GCGCGAGCAG ATTGCGGAGT TGAAGCAGAA GCGTCCCGAA
CTCTCGGCAG ATGTCGATTT CCGTGGCACC GTCACTGCCT GCGGCGCGCC GAAAGATGCG
CCGGAGTACG TTGAGCAGGA GTGA
 
Protein sequence
MRILMIQPNY HAGGAEIAGN WPPSWVAYIG GALRKAGYPN LRFVDAMTNN LPDRTVEQII 
RANRPDVVMA TAITPMIYKA QETLRLAREA NPGCKTILGG VHPTFMYAQV LTEAPWIDYI
VRGEGEEIIV NLMRAIENGS DERDRYQIQG IAFLDGDRVV ATPAHPPIAD LSTLTPDWSL
LEWEKYIYIP LNVRVAVPNF ARGCPFTCRF CSQWKFWRKY RVRDPIAFVD EIELLVREYK
VGFFILADEE PTIHRKKFVA MCEELERRKL GIHWGINTRV TDILRDEQYL PLYRRAGLVH
VSLGTEAAAQ MNLDRFRKET TIEQNKRAIK LLHDQGIVAE AQFIMGLENE TPETIEETYR
YALDWKADMA NWNMYTPWPF AELFEELGDR VEVRDFSKYN FVTPIIQPDA MTREQVLKGV
LRNYARFYMR KAFLSYPWIR DPFKRRYMLG CLKAFAKTTF TKRFYDLERV HLDGSIDLGF
DETKVLTREQ IAELKQKRPE LSADVDFRGT VTACGAPKDA PEYVEQE