Gene Rcas_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1583 
Symbol 
ID5539059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2032707 
End bp2033801 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content64% 
IMG OID640893721 
Productradical SAM domain-containing protein 
Protein accessionYP_001431694 
Protein GI156741565 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAC CGCCGCATCC ATCTCGCCCG ATGCGTCACG CGCCGCGCGA TTTTGCGTTG 
ACGCCGCTCA ATATCTATTG GGAGATGACG CAGGCATGCG CGCTTGCCTG CCGGCACTGC
CGCGCCGAAG CCATGCCGCA GCCACATCCG TTGCAACTCA CATTCGAGGA GAGTGTGCGC
TTCCTGCGGC AAATCCCCGA CTTCGGCAAC CCGTTGCCGC AGTTGATCCT GACCGGCGGC
GATCCGCTCG CCCGACCGGA TCTGCTCGAC CTGATCGATG CAGCCCGCGC GCTTGGCGTA
CCGGTCTCGA TCACACCGAG CGCAACACCG AACCTGACGC GCGCGATGCT CGCGGCGCTC
AAGGCGCATG GTGTCGAGGC GCTTGGATTA AGCCTCGATG GCTCGAATGC CACCCGTCAC
GATGCCATTC GTGGTGTCGA AGGCACATTC GAGCGAACCG TCGAGGCAAT GGACTGGGCA
GCAGAACTCG GCATGCCGTT GCAGATCAAC ACACTGGTCG CAGCCGAAAC CGCCGATGAT
CTTCCGGCTA TCTATGCACT GCTTACCACA AAACAGGTCG CCCGCTGGAG CCTGTTCTTC
CTGATCTCCG TCGGGCGCGG GCGGGTGCTC GAGTCGCTAA CGCCACCCGC AGCGGAGCGG
TTGATGGTCT GGATCTATCG CATTGCACAG GAAGCGCCGT TTGCCGTTGC TACGACCGAG
GCGCCGTCGT ACCGGCGAGT GGCGCTCGGC GAAATGCGCG CTGCCGGGTT GAGCGGCGAA
CAGATCCGAC AGACGCCGAT CGGACGCGGT TTTGGCATCC GTGACGGCAA CGGCATTATG
TTTGTCTCGA ATACGGGCGA CATCTGCCCT GCGGGATTCC TGCCGCTGCC CGCCGGCAAT
GTGCGCACCG ACCATATCGT GCAGGTCTAT CGGGAGTCGC CGTTGTTCGC CGCGCTGCAC
GATCCGACGA CGTTTGGCGG GCGGTGTGGA CGTTGTGAGT ATCGGGCGAT CTGTGGCGGG
TCGCGAGCGC GCGCCTTCGC CGCGAGCGGC GATCCGCTGG CGGAGGACCC GCTCTGCACC
TATCAACCGG CATAG
 
Protein sequence
MMAPPHPSRP MRHAPRDFAL TPLNIYWEMT QACALACRHC RAEAMPQPHP LQLTFEESVR 
FLRQIPDFGN PLPQLILTGG DPLARPDLLD LIDAARALGV PVSITPSATP NLTRAMLAAL
KAHGVEALGL SLDGSNATRH DAIRGVEGTF ERTVEAMDWA AELGMPLQIN TLVAAETADD
LPAIYALLTT KQVARWSLFF LISVGRGRVL ESLTPPAAER LMVWIYRIAQ EAPFAVATTE
APSYRRVALG EMRAAGLSGE QIRQTPIGRG FGIRDGNGIM FVSNTGDICP AGFLPLPAGN
VRTDHIVQVY RESPLFAALH DPTTFGGRCG RCEYRAICGG SRARAFAASG DPLAEDPLCT
YQPA