Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1580 |
Symbol | |
ID | 5539056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2029934 |
End bp | 2030983 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893718 |
Product | histidine kinase |
Protein accession | YP_001431691 |
Protein GI | 156741562 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC AGGACGGGCA AGAACGATCA GCGGCTCTCC GCGAAGCGCG TGACATTGTT GCAGAACAGT TGGAGCAGTT GCGCGCGCTG GCGGAACACG AGCGACAGGA GATAGCAACA CTTGCAGCGG CACTGCGTCA GGCGGAGCGC GAACTCGATG AGGTGACCCT CCAGTATCGC ACCGCAGTGC AGCGACGACG CTCAGGCGCC GAGTCGCTGA ACCGGCGGAT GACGGAACTG CGAGAGCAGT GTGATGCCCT GAGCCGCGAC GTTGATGCGC GCCGCAGTGG TCTGCGGCAG ATCGAACTGC TCATTCGCCA GATCGAGATG AGTAGCAGCG CGCTGAGCAA CACCGGAACA GGAGCGACAT CAGACCCATG GGCGCTGGCG TTGCGTTCGC AGGTGATCCA TGGGCGCGAG GAAGAGCGGA TGCGTCTGGC GCGCGAGGTC CACGACGGAC CGGCGCAAGT GCTTGCGAAC TCGTTGATGT TGCTGGAGAC GTGTTATTCC CTGGCGCAGC AGCAAACCGG CGAGCACGCC GAAAAACTGG CGGTGATGAT TGGTCGGCTG CGCGACGCCA CTCGTGAGGG GTTGAGCGAG GTGCGTCGCT TCATTGCCAA TCTCCGACCG GGACAAGTCG CTGAACGTGG GTTGGTGGAG GCGCTGCGTG AGTATCTGCG CGCCTATGGC AACACGTACA ATGTGCCCGT GGTGTTTGAG GCTGATGCAG CGCCCCGACA GGCAGACGAA GTCGAGATCG TTCTCTACCG TATCGTCCAG GAAGCGTTGC AAAATGCACA CAAATACGCA CGTGGATCGC CGATCACCGT GCGTCTGGCA TATCGCTCAG ACACCATCAC CTTGTCGGTG CGCGATGAGG GTCCAGGATT TGATCCGCGC GAAGTAGCGC GACGCGCCGG GAAGAGCAAT TGGGGATTGA CAAGCATGCG TGAGCGGGCT GAGTTGATCG GCGCACGGCT GACCGTCGCA TCACGTCCAG GTTATGGCAC AGAAGTGACG GTTGTGTTAC CACTGGAACA AACGGGGTGA
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Protein sequence | MNSQDGQERS AALREARDIV AEQLEQLRAL AEHERQEIAT LAAALRQAER ELDEVTLQYR TAVQRRRSGA ESLNRRMTEL REQCDALSRD VDARRSGLRQ IELLIRQIEM SSSALSNTGT GATSDPWALA LRSQVIHGRE EERMRLAREV HDGPAQVLAN SLMLLETCYS LAQQQTGEHA EKLAVMIGRL RDATREGLSE VRRFIANLRP GQVAERGLVE ALREYLRAYG NTYNVPVVFE ADAAPRQADE VEIVLYRIVQ EALQNAHKYA RGSPITVRLA YRSDTITLSV RDEGPGFDPR EVARRAGKSN WGLTSMRERA ELIGARLTVA SRPGYGTEVT VVLPLEQTG
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