Gene Rcas_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1569 
Symbol 
ID5539045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2016681 
End bp2019101 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content66% 
IMG OID640893707 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001431680 
Protein GI156741551 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGA CCCAAACGTC TGATGCTCAG CCATTATCTA CCCGGCGTCC CTCCAGCGCC 
GGTTGTCTGC TGGCAGCGCT GGTCGTCATC GTTATGGCGG CGTGCGGCGT TGTGGCGCTG
ATGCTGATCA TCGCGCCGCA GGCGAATGCG CAGATGGTCG GACTCCTTAC TGCGCCGGCC
GCTGCGCTGA TGTTCGGTCT ACTCTTCCTG GGAGCGCTGG CGATCACGCG CGTGCCGCGA
ATGCGCGCGG CACTGTGCGC CTGGTTGCTG GCGCTGCCGC TGACGTGGTT GATGATCCCG
GCGACCCTGT TGCCATCGTC TGAGGCGCAG ATTGCCGCCG CCGCGCGTGT GGCGCTTATG
GCGGCGTACT TTGGCGCGCT CTTGATCGTG GTGCGCTGGC GTTACCCGGA GCGAACCGGA
ACCGGACGGG TGGGTCTACC GCTCGCGGCC GGTGCAGCGG CGCTGCTGGC GCTTCCCTGG
CTGGCATGGG GCGCATTCGG ATCACTGTTT GACATCCTGC TTGGGCTGGC CGCCGCCGGG
TTGTTTGGCG CGGCGGCCAG TCTGCTGGTT GCACGGGTCT ATCTGCGTCC GCTTCCGAAC
GATCCAGACA GTCCAGGACT CTTGACAGGC GGCATTGTTA TCGGAATGAT CCTCCTGATC
CTGGGGTGGA ATATCGGCGT TGGCGGGCAA ACGTTGCTGT TGTTACCGCT GCTGCCGACG
CTGGGATGGC TTGCAGGTGC AGTCGCTGGC GTCGAGCGCG GAGGCGCGCC GGACTCACGG
GCGCTCGCGC TGTTCGCGGC GCTGGCGATT GCGCCGCCGC TGCTGTTCGC CGACCCGGAT
ACGCTCCATA TCGAATTGCT GGCGCAGGGG CGCGAAGGGA TTTCCTGGGC AATGAGCGCA
GTCGGCGTTG GCGTCCTGCT GGCACTGATG TTGTCGGGTG GAATGCCGCT GCTGCGTCGC
GCGACAGAAC GCGCGCCACA GATCGGCGTC GCCAGCGCCG CAGCGCTCTG GCTGGCGGGC
GCCGCTGTGT ATGTCAGCGT CGGGCAACCC GGGTTGTATG GCGACCGACT GTTCGTTATT
CTGAAAGACC AGGCGGACCT GTCTTCCGTG GCTGCAATCG ATGATTACCA GGCGCGGCGG
CACGCCGTGT ACGAGACTCT CGTGCGCCAC GCAGATGCAA CGCAAGCCGG ATTGCGCGAC
GAGTTGACCC GCTTCGGCAT CCGGCATCGC CCCTACTACC TGATGAACGC GCTGGAAGTC
GAGGGAGGCA TCCTGGTGCG TCTGTGGCTG GAGATGCGAC CGGAGGTGGA TCGGGTAGTT
CCCAATCCGG TGCTGCGCCC ACTCCCTGAG CCGCTGGAGG CGCGCAGCGG CGATATGCTC
GCTCCCGACG AACCGCTCTG GAACCTGACC ATGATCAATG CCGATCGCGT CTGGAACGAA
TTGGACGTGC GCGGCAAGGG GGTCGTTATC GGCTTGATGG ACAGTGGAGT GCAATGGGAT
CATCCTGAAT TGCGCGACAG TTACCGGGGT GTGCGCACGG ATGGCACGGT CGTCCACGAG
TACAACTGGT ACGATCCGTG GGGCGGTACG ACGGAACCGG TGGATTACAG CGGGCATGGC
ACCTTCACCC TGAGCGCGGC GGTCGGCAAT CGCGTCGGCG TTGCGCCCGA CGCCACATGG
ATCGCGTGCG TCAACCTGGC GCGCAACGTG GGGAATGCGG CGCGCTACCT GGATTGCATG
CAGTTTATGC TGGCGCCCTT CCCGCCGAAT GGCGACCCGC TGCGGGATGG CGACCCGGCG
CTCGGCGCCG ATGTAACGAA CAATTCCTGG GGCTGCCCGC AAGACCTGGA GGGGTGCGAT
CCGAACACAC TTCTGCCCGC AGCCGAGTCG CTGCGCGCTG CGGGGATGGT CACCGTCGCC
GCAGCCGGCA ACGACGGACC GGCGTGTAGC AGCCTGAATG CACCTCTTGC GCTCTACGAC
GCCGTTTTGA CCGTTGGCGC CGTGCAGCGC GATGGCATCG TCGCCCCGTT CAGTAGCATC
GGTCCTGTGC TGGCGGACGG AAGCGGGCGG ATCAAGCCGG ATATTGCTGC ACCAGGCGCA
AACGTGCTTG CCGCTGCGCC GGGGAGCGGC TACATGACCG GCAGCGGCAC CTCGATTGCA
GCGCCCCACG TGACCGGCGT GGTTGCGCTG ATGTGGTCGG CAAACCCAAC GCTCATCGGT
GATGTCGAGC GCACGGAAGA AATGCTGCGC ACCACTGCGC AACCGGCGCC GCAGGAAGCG
ACGACGCTCC CGCTGTGCGC TGGCAGCGAC GGTTCGCCGC TGACGATCCG CTATGGCGCC
GGAATCGTCG ATGCGTATCG AGCGGTGCGC GCTGCCGCGC GATTTGACAG CCATAGCGCG
CAACCTTTAC AATTCAGATA G
 
Protein sequence
MSMTQTSDAQ PLSTRRPSSA GCLLAALVVI VMAACGVVAL MLIIAPQANA QMVGLLTAPA 
AALMFGLLFL GALAITRVPR MRAALCAWLL ALPLTWLMIP ATLLPSSEAQ IAAAARVALM
AAYFGALLIV VRWRYPERTG TGRVGLPLAA GAAALLALPW LAWGAFGSLF DILLGLAAAG
LFGAAASLLV ARVYLRPLPN DPDSPGLLTG GIVIGMILLI LGWNIGVGGQ TLLLLPLLPT
LGWLAGAVAG VERGGAPDSR ALALFAALAI APPLLFADPD TLHIELLAQG REGISWAMSA
VGVGVLLALM LSGGMPLLRR ATERAPQIGV ASAAALWLAG AAVYVSVGQP GLYGDRLFVI
LKDQADLSSV AAIDDYQARR HAVYETLVRH ADATQAGLRD ELTRFGIRHR PYYLMNALEV
EGGILVRLWL EMRPEVDRVV PNPVLRPLPE PLEARSGDML APDEPLWNLT MINADRVWNE
LDVRGKGVVI GLMDSGVQWD HPELRDSYRG VRTDGTVVHE YNWYDPWGGT TEPVDYSGHG
TFTLSAAVGN RVGVAPDATW IACVNLARNV GNAARYLDCM QFMLAPFPPN GDPLRDGDPA
LGADVTNNSW GCPQDLEGCD PNTLLPAAES LRAAGMVTVA AAGNDGPACS SLNAPLALYD
AVLTVGAVQR DGIVAPFSSI GPVLADGSGR IKPDIAAPGA NVLAAAPGSG YMTGSGTSIA
APHVTGVVAL MWSANPTLIG DVERTEEMLR TTAQPAPQEA TTLPLCAGSD GSPLTIRYGA
GIVDAYRAVR AAARFDSHSA QPLQFR