Gene Rcas_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1561 
Symbol 
ID5539037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2004133 
End bp2005035 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content62% 
IMG OID640893699 
Producthypothetical protein 
Protein accessionYP_001431672 
Protein GI156741543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG CACTAACTGA TCAGGAAAAC TCTGCCAGCG CGACGGAGAC CGGTCCGTTC 
TACGGATGGC GGTTCATTCG CCGTGAACTG CCGGATGGCA TGATCGAATG GGCGCAGGTC
CCGTTGACCT ACGAAGACGT TTTGCATCCT GAAGAGGGGG ATCAGGTGAC CCATAGCAGT
CTGCACCAAC GGCGCTGGCA TTATCTGCGC GAAGTATTCG AGCGACAGGT CGCCGATGAT
CCCACCGCTG TCGTGCTCGA CGATGTGCGG ATTGAATGGG ATGTTCCCGA TCTCAAACCG
CACGGTCCTG ATCTGATGGT GATCTTCGGT GTGAAGGAGC GCAAGAACTG GAGCACTTTT
CGGGTTGCTG AAGAAGGAGT GCGTCCTGCG TTGATTGTGG AAATCACCTC GCCGGAGACG
CGCGGGCACG ATGTGATGAC GAAGGTCGAT CACTATGAGA TGGCAGGAGT GCCGCTCTAT
GTGATTGTTG ATGGGATTGA ACGGCGTGGT CAATTGGGGG TGCGGCTGAT CGGGTATACG
TTGACCCCGG AAGGGTACCG GATGCTCGCG CCGGATGATC AGGGGCGATT GTGGCTGGCG
CCGGTGCGCG TCTGGTTAGG GGTGCGCAAC GGTGACATCA TTTGTTACGA TGAAGCAGGC
AACCCGTTGG GCGATCACCT CGCGCTGGCG CAGGCGTTGC AGGAAGAAGA GCGCGCCCGC
CGGGCCGCCG AAGCGCGCGC CGCCGAAGAA GAGCGCGCCC GCCGGGCCGC CGAAGCGCGC
GCCGCCGAAG AAGAGCGCGC CCGCCGGGCC GCCGAAGCGC GCGCTGTGGA AGCCGAGTCG
CGCATTCGGC AACTGGAAGC GGCACTGCGA CGGATGCAGC AAGGAGAGGA GCCATCTTCC
TGA
 
Protein sequence
MSAALTDQEN SASATETGPF YGWRFIRREL PDGMIEWAQV PLTYEDVLHP EEGDQVTHSS 
LHQRRWHYLR EVFERQVADD PTAVVLDDVR IEWDVPDLKP HGPDLMVIFG VKERKNWSTF
RVAEEGVRPA LIVEITSPET RGHDVMTKVD HYEMAGVPLY VIVDGIERRG QLGVRLIGYT
LTPEGYRMLA PDDQGRLWLA PVRVWLGVRN GDIICYDEAG NPLGDHLALA QALQEEERAR
RAAEARAAEE ERARRAAEAR AAEEERARRA AEARAVEAES RIRQLEAALR RMQQGEEPSS