| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1559 |
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| Symbol | |
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| ID | 5539035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2001446 |
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| End bp | 2002507 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893697 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001431670 |
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| Protein GI | 156741541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCT ATCGCCTCTT CCTCAGCGGT CTAGGCAATG TGGGCCGCAG TTTTCTTGCC
ATCATGCAGT CACAGGCGTC GCTCCTCGCC AGGCGCTATG GCGTTGCGCT GCGCCTGGTT
GCCGCAGCCG ACTCAGGGGG CGCGGCAATC TATGCGACTG GACTGGACCC GGCGACGATC
CTGGCGCTCA AACAGCGTGG TCAGAGCATT GCGGCGCTGC CGGAAAGCGG CATCTTCGGA
ATTGCTCCTG TTGAAGTCAT TCAGCGCATC GAAGCGGACA TCCTCCTCGA AGCGACGCCG
GTCAATTTGA AAACAGGGCA ACCGGGTCTT GATACCGTGC GCGCAGCGTT GCGGCGCGGT
ATGCACGCAG TGCTGGCAAA TAAAGGACCG CTGGCGCTCG CATATACAGA ACTGGCTGAC
CTCAGCGATA TGGGAGAGGC CACTGAGGAA CGCGGCGATC CGCGCGACTG GCCCGCGCTG
CGCTTCAGCG CCTGCGTCGG CGGCGCGTTG CCGACCATTG CAATTGGGCG ACGCGACCTG
GCAGGCGCGA CGATTGTGCG CGTCGAGGCG GTGCTCAACG GCACAACGCA GGGCATCCTG
CGCGCGATGG AACAGGGGAG TTCATATGCT GACGCACTGG CGGAGATGCA ACGACGCGGA
CTGGCGGAGA CCGACCCTTC CCTCGATGTC GAAGGTTGGG ATGCCGCTAG TAAACTGACT
ATTCTTGCCA ATGCGGTGTT GCGCCAACCC ACAACGCTGG CTGATGTCGC CGTGCGCGGC
ATTACGGACC TGACCACCGG AGACCTGCGC GCCGCACTGG ATCGCGGCGA ACGTATTGTG
CTCCTCTGCC TGGCGGAGCG TCGAGGCGGC GACTTCCACC TGAGCGTTCA ACCAACATCA
TTGCCGCTGA TCCATCCATT GGCGCGGATG AGCGCCGATG AGATGGGCGT AGTCTACTAC
ACCGACATCA CCGGCAGACA GACTGCGACA ACGCTGGAAA CCGATCCGAC TCCGACTGCC
GCAGCCATGC TGCGCGACAT TCTTGATATT GCTGCGCGTT GA
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| Protein sequence | MRTYRLFLSG LGNVGRSFLA IMQSQASLLA RRYGVALRLV AAADSGGAAI YATGLDPATI
LALKQRGQSI AALPESGIFG IAPVEVIQRI EADILLEATP VNLKTGQPGL DTVRAALRRG
MHAVLANKGP LALAYTELAD LSDMGEATEE RGDPRDWPAL RFSACVGGAL PTIAIGRRDL
AGATIVRVEA VLNGTTQGIL RAMEQGSSYA DALAEMQRRG LAETDPSLDV EGWDAASKLT
ILANAVLRQP TTLADVAVRG ITDLTTGDLR AALDRGERIV LLCLAERRGG DFHLSVQPTS
LPLIHPLARM SADEMGVVYY TDITGRQTAT TLETDPTPTA AAMLRDILDI AAR
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