Gene Rcas_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1544 
Symbol 
ID5539020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1971248 
End bp1972381 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content65% 
IMG OID640893682 
Productmagnesium chelatase ATPase subunit I 
Protein accessionYP_001431655 
Protein GI156741526 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID[TIGR02030] magnesium chelatase ATPase subunit I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000269356 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGACGA CCTCTGTTGA AACTCAGAAT GGCAAGACGA CCGACAGCGG CGTCACAACG 
CTGCCGGTCT ATCCATTTAC TGCGATTGTC GGTCAGGCAG AACTGAAACT CGCGTTGCTT
CTCTGTGTGA TCGATCCAAC GATTGGCGGC GTGATGGTTA TGGGACATCG CGGAACGGCG
AAGAGCACGG CGGTGCGAGC ACTGGCAGCG TTGCTCCCGC CGCAGCGCGC CGTTGCCGGG
TGCCCCTACG GTTGCGATCC CGCCGCGCCG TCGTCGATCT GTCCACACTG CGCTGCACCC
GACCAGGACG CCGCGAAGAA CGGGCAGGAG AAACGGCGCG CCAGCGCAAA ACGCCCGCCA
TCGGTTCTGC GCCCGGTACC GGTGGTCGAT CTGCCGCTCG GCGCTACCGA AGATCGGGTA
GTCGGCGCGC TCGACATTGA GCGCGCATTG GTCGAAGGAG TGCAGACATT TGCGCCAGGG
TTGCTGGCGC GCGCCAATCG TGGCTTTCTC TACATCGACG AAGTGAACCT GCTCGAAGAT
CATCTGGTCG ATCTGCTGCT CGACGTCGCG CAGAGCGGCG TCAACGTCGT TGAGCGCGAG
GGCATCTCGG TGCGTCATCC GGCGCGATTC GTGCTCGTGG GCAGCGGCAA CCCCGAAGAA
GGCGACCTGC GCCCACAGTT GCTCGACCGG TTTGGGCTGC ATGCGCGCAT CACCACGATC
GACGATGTGG CAGAGCGCGT CGAGATCGTC AAACGTCGAC GCGCCTTCGA TGCCGACCCG
GTAGCCTTTG CGCAGCAGTG GGAGCGGGAG CAGCAACGGT TGCAGCGCCG CATCCGCATG
GCGCAGAAGC GTCTTCCCTC GGTTGAGTTG ACCGACGAGG CATTGTATGC TGCGGCGCGG
TTGTGTGTGG CGTTGAATAT CGACGGGCAC CGTGGCGAAC TGACACTGGC GCGTGCTGCG
GTGGCGCTTG CCGCGTTCGA GGGGCGCGAG AGCGCACAGC CGTCCGACAT TGCGCGGGTT
GCGACGCTGT CGCTGCGGCA CCGATTGCGC AAAGACCCGC TCGAAACATC CGGCGACGAT
GCGCGGATCG AACGCGCCGT TGCTGAAACG ATCGGCGCCG CAGCGCGCGC GTGA
 
Protein sequence
MTTTSVETQN GKTTDSGVTT LPVYPFTAIV GQAELKLALL LCVIDPTIGG VMVMGHRGTA 
KSTAVRALAA LLPPQRAVAG CPYGCDPAAP SSICPHCAAP DQDAAKNGQE KRRASAKRPP
SVLRPVPVVD LPLGATEDRV VGALDIERAL VEGVQTFAPG LLARANRGFL YIDEVNLLED
HLVDLLLDVA QSGVNVVERE GISVRHPARF VLVGSGNPEE GDLRPQLLDR FGLHARITTI
DDVAERVEIV KRRRAFDADP VAFAQQWERE QQRLQRRIRM AQKRLPSVEL TDEALYAAAR
LCVALNIDGH RGELTLARAA VALAAFEGRE SAQPSDIARV ATLSLRHRLR KDPLETSGDD
ARIERAVAET IGAAARA