| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1536 |
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| Symbol | |
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| ID | 5539012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1959149 |
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| End bp | 1960393 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893674 |
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| Product | light-independent protochlorophyllide reductase subunit N |
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| Protein accession | YP_001431647 |
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| Protein GI | 156741518 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01279] light-independent protochlorophyllide reductase, N subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.120446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00259667 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGCGA CAGTCATTCG GGAAGACGGC GCATACCATA GTTTCTGTGG GTTGACGTGC
GTGGGCTGGC TGTACCAGAA GATTAAGGAT AGCTTCTTTC TGGTGCTCGG CACGCACACC
TGCGCTCATC TGCTCCAGAA CGTGCTCGGC GTCATGGTGT TCGCCCGTCC GCGCTTTGGC
GTGGCGCTGA TCGAGGAGGC GGATCTGTCG AAGCAGCAGC CGGAGTTGAA CGCCATTATC
GATGAGATCG TCGCCGATCA CCATCCGTCG GTCATTTTCC TGCTCTCTTC CTGCACGCCG
GAGGTGATGA AAGTTGAGTT CGACGGTCTG GCGCGCGCGG TCAGTCGCCC CAATCTGCCG
GTGCTCTTCG TGCCTGCCAG CGGTCTCGAT TATACCTTCA GCCAGGCGGA GGACTCGGTG
TTGCAGGCGT TGCTCCCATT TTGTCCGGTC GCGCCTGCCG ATGACCGGCG GGTGGTGTTC
CTTGGCTCGG TCAACGACGC AATTGCCGAT GATTTCCACA CGGAAGCCGC GCGCCTCGGC
ATTCCGGTCG CCGGGTTTCT GCCCGAAAGC CATTTCCGCG ACTTGCCGCC GATTGGTCCG
GGCACGGTGG TCGCGCCGCT GCAACCATAC CTGGCGAAGG TTGCCGGTCG TCTGGCGCGT
GAACGCGGCG CGACGGTGAT GACCTCGCTC TTCCCGTTCG GTCCCGACGG AACGCGCGCA
TTCTGGGAGG ATCTCGCCGC TGCGATGGGC AAAGCGGTTG ATCTGAGCGA GCGCGAGCGG
CAAGCGTGGG AGCGCCTCGA GCCGCACCTC GAGATACTGC GCGGCAAGAA GGTGTTCTTC
ACAGCGGATA ACCTGATGGA ATTGCCGCTG GCGCGGTTTC TCAGGAACGC GGGATGCATC
ATTCTCGAAT GTAGCAGCCC GTACATCAAT CGTAAGTTCC ATGCGCGTGA ACTGGCGGCG
CTCGACGGGG TGCGCGTCGT CGAGCAACCC AACTTCGACC GGCAGTTGCG CGACATCCGA
GCGTTGCGTC CCGATCTGGT GATCAGCACC CTGGCGACAA CCAACCCGCT CGTGGGGCAT
GGCGTGGTGG CGAAGTGGAG CACCGAGTTC AGTTTTATGC CGATCCAGGG CTGGAGCGGC
GCTGCAACGC TCGCCGGCAT GTTCACCCGA CCGCTCAAAC GCCATGCGCA ACTCGACCCG
CTTATGGACG ATCCGCTGTG GGTGGCGGGG TTGATGCCGG GGTAA
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| Protein sequence | MSATVIREDG AYHSFCGLTC VGWLYQKIKD SFFLVLGTHT CAHLLQNVLG VMVFARPRFG
VALIEEADLS KQQPELNAII DEIVADHHPS VIFLLSSCTP EVMKVEFDGL ARAVSRPNLP
VLFVPASGLD YTFSQAEDSV LQALLPFCPV APADDRRVVF LGSVNDAIAD DFHTEAARLG
IPVAGFLPES HFRDLPPIGP GTVVAPLQPY LAKVAGRLAR ERGATVMTSL FPFGPDGTRA
FWEDLAAAMG KAVDLSERER QAWERLEPHL EILRGKKVFF TADNLMELPL ARFLRNAGCI
ILECSSPYIN RKFHARELAA LDGVRVVEQP NFDRQLRDIR ALRPDLVIST LATTNPLVGH
GVVAKWSTEF SFMPIQGWSG AATLAGMFTR PLKRHAQLDP LMDDPLWVAG LMPG
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