| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1531 |
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| Symbol | |
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| ID | 5539007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1950355 |
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| End bp | 1951554 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893669 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001431642 |
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| Protein GI | 156741513 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.199399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0219114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCG AGATTAAGGT CCCAACACTG GGAGAGTCGA TCGTCGAAGC CACGGTTGGG
GCATGGCGCA AACACGAAGG CGACCCGATC ACCGCCGGTG AGGTGCTGGT CGAACTCGAA
ACCGATAAAG TAACCGTTGA GGTGACCGCC GAAGAGTCTG GGGTTCTGAG CCACATTCTC
AAACCTGATG GCGCGATTGT GACCATGGGC GAAATCCTGG GCATTATCGC TGAAACCGCT
GAGACGCCGG TCGCGGCGCA GTCGCACGAT GGCGCATCCG GAACCAGAGT GATGGCTACT
CCGGTCGCGC GCCGGGTCGC CGAGACGCAG GGGGTGGACA TTGCCGCCAT CCCCGGCAGC
GGTCCCGGCG GTCGGGTGAC GAAAGAGGAC GTGCTCAAAC GCGAGAGGGC GCCCCGTCCT
GCGCCGATGG AACACACCCC CCCGCCGCCC GCTCCGACAT CGGCGCCTCC GCCTGTTCCT
GCGCCGGTCT CCGGCGAAGG ACGGCGTGAG GAGCGCATTC GGATGAGTCG CCGCCGCCAG
ACGATTGCCG CCCGTCTTGT TGAAGCGCAA CGCACAGCGG CAATGCTGAC GACATTCAAC
GAGATCGATA TGAGCGCCGT CATCGACCTG CGCAAGCGCC ATCGCGATCC GTTTCGCGAG
CGTCATGGCG TCGGTCTCGG TTTCATGTCG TTCTTCACGA AAGCAGTCAT CGGCGCGCTG
AAAGCCTTCC CGTTGCTCAA TGCCGAAATC CGTGGCGACG AGATCATCAT CAAACACTAT
TACGACATCG GTATTGCCGT CAGCACCGAC GAAGGGTTAG TCGTGCCGGT GTTGCGCGAC
GCCAATCGCC TCAGTTTTGC CGAGATCGAG CGCGGCATCG AAGAACTGGC GCGCCGCGCC
CGCGAGTCAA AACTCACGAT TGCCGATCTC CAGGGAGGCA CCTTCACCAT CACCAACGGC
GGTATCTTCG GCTCACTCAT GTCAACGCCA ATCCTCAACA CACCGCAGGT TGGCATCCTG
GGCATGCACA AGATTCAGGA GCGCCCGGTA GCGCTTGATG GGCAGGTCGT CATTCGCCCG
ATGATGTATG TCGCGCTTTC CTACGATCAC CGCATTATCG ACGGGCGTGA GGCGGTATCA
TTTTTGGTGC GGGTGAAAGA ACTGGTGGAA GACCCAGAGC GACTGTTGCT GGAGGGGTAA
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| Protein sequence | MAVEIKVPTL GESIVEATVG AWRKHEGDPI TAGEVLVELE TDKVTVEVTA EESGVLSHIL
KPDGAIVTMG EILGIIAETA ETPVAAQSHD GASGTRVMAT PVARRVAETQ GVDIAAIPGS
GPGGRVTKED VLKRERAPRP APMEHTPPPP APTSAPPPVP APVSGEGRRE ERIRMSRRRQ
TIAARLVEAQ RTAAMLTTFN EIDMSAVIDL RKRHRDPFRE RHGVGLGFMS FFTKAVIGAL
KAFPLLNAEI RGDEIIIKHY YDIGIAVSTD EGLVVPVLRD ANRLSFAEIE RGIEELARRA
RESKLTIADL QGGTFTITNG GIFGSLMSTP ILNTPQVGIL GMHKIQERPV ALDGQVVIRP
MMYVALSYDH RIIDGREAVS FLVRVKELVE DPERLLLEG
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