| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1526 |
|---|
| Symbol | |
|---|
| ID | 5539002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1945009 |
|---|
| End bp | 1945485 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640893664 |
|---|
| Product | ribosomal protein S6 |
|---|
| Protein accession | YP_001431637 |
|---|
| Protein GI | 156741508 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.506351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0309301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGAGC GTCGTCGTGA CTACGAACTG TTATTCATTA TCCCCCCAAT ACGAATTGGC
GATGAGGAGA TTCACAACGC CATCGAGCGA GTCTCCCAGG CGATCACCAA TCTTGGTGGC
GTTATGACAG CCATCAATCA CGCGCCACCC TGGGGGCGGC GGAAATTTGC CTACCCGATC
CGCGCCTATG TCGAAGGCGA AGCGAGCCGT CGGGTGTTCA CCGAAGGGTA TTATGTGCTG
ATGAACTTTC AGATGGCGAC GGATCGCGTC GCTGAACTCG AACGCCTGCT CAAACTCAAC
GACTCGGTGC TGCGCTATCT GCTGACGCTG GTCGAGACGC GCGGCGCGGC GCGTTCTACG
GTCGCACCGG TCGAGTCGTT CGATGGTGCA GAGCCTGAGG ATGAAGACTT CGAGGAGGAT
GAAGAAGAAC TGGACGTGGA GGACGTCGAA GCAGGCGACG AGGACGATGA AGACTGA
|
|---|
| Protein sequence | MRERRRDYEL LFIIPPIRIG DEEIHNAIER VSQAITNLGG VMTAINHAPP WGRRKFAYPI
RAYVEGEASR RVFTEGYYVL MNFQMATDRV AELERLLKLN DSVLRYLLTL VETRGAARST
VAPVESFDGA EPEDEDFEED EEELDVEDVE AGDEDDED
|
|---|
| |