Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1520 |
Symbol | |
ID | 5538996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1939902 |
End bp | 1940687 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893658 |
Product | hypothetical protein |
Protein accession | YP_001431631 |
Protein GI | 156741502 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.110236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGC TGAAACGACC CGTTCGCCCC CGGCGCGTCC ACTACCCGGA GAGCGACGGC AAACCCATGG GTGAGACCGA TCTGCACCGC GACTTGATGC CCGATCTCAT CTTTGCTCTG AAGTGGTTCC TGAGTTCGAC CATCGCCTAC GTGGCGGGCA ATCTGTTCAT TTACTACGAA GAAGGCAACC CGCGCGCCGT CGTTGCGCCT GATGTGTTCG TCATCATGGG TGTGCCGCAG CGCCGTCGTC AGATCTTCCA AACCTGGAAG GAAGGCGGGC GTGTGCCGGA TGTAGTCATC GAGATTACCT CAAAACGCAC GCAGAAGGAT GATCGTGAAC GCAAACCGGC GATCTACGCT GCGCTGGGAG TGCCGGAGTA TTTTATCTTT GATCCCAACG GCGACTATCT CGATCCACAG CTTCAGGGTT TCCGGCTGGT CAATGGGATG TATGAACGTA TGCAGACGTT TCCGTTGAGG AGCGACGCCC TGAACCTGGA ACTGCGCCAG GAAGACTCGA TCCTGCGGCT CTATAACTCG CAAACCGGTG AGCGGTTGCC AACATCGGAC GAAGAAGTGC TGGCGCGGCG TGCAGCGGAA GCGGCGCGTC TGGCTGCCGA ACGCGAGTTG CTCGCAGAAA CGCAAGCGCG TCTGGCGGCG GAGGCGCATG CCGCAAAACT GGAAGCCCGC GCCGCAAAAT TGGAGGCAGA AGTTGCCCGT TTGCGCGCTG CACTGGCGAA GCGCGCGAAA TCGTCAACCG AACCACAGGC GCCAGAGGAG GCGTAG
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Protein sequence | MTTLKRPVRP RRVHYPESDG KPMGETDLHR DLMPDLIFAL KWFLSSTIAY VAGNLFIYYE EGNPRAVVAP DVFVIMGVPQ RRRQIFQTWK EGGRVPDVVI EITSKRTQKD DRERKPAIYA ALGVPEYFIF DPNGDYLDPQ LQGFRLVNGM YERMQTFPLR SDALNLELRQ EDSILRLYNS QTGERLPTSD EEVLARRAAE AARLAAEREL LAETQARLAA EAHAAKLEAR AAKLEAEVAR LRAALAKRAK SSTEPQAPEE A
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