| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1519 |
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| Symbol | |
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| ID | 5538995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1938217 |
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| End bp | 1939887 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640893657 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001431630 |
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| Protein GI | 156741501 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.025545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA TCGTCACTGC GGGAGAAATG CGCGCCATCG AAGAAGCGGC GGTCGCTCGC
GGCGCGACCT GGTCGGGTTT GATGGAACAG GCGGGTACAG GAGTGGCGCG GGTGGCGCGC
GAGGCGATCG GCAATCCTGC GGGTCGCTGC GCGCTGGTGC TGGTCGGTCC TGGCAACAAC
GGCGGTGATG GGTTGGTGGC GGCGCGCCTG TTGCACGACG CTGGCGTGAA GGTGATGCTC
TACTTCTGGC GGCGGCAGGA AACGTCCACT GATGGAAACT GGCGCTTGTG TCGTGAACGC
GCCATCTCCG AAGTGCGCGC CGCCGATGAT CCGCAGAGTC AGGCGCTGCG CCGTGCGCTT
GCCGAAAGCG ACCTGGTGAT TGACGCGCTT CTCGGCTACG GCGCCAACCG TCCGGTTGAA
GGCGAACTGG CGACCATCAT TGCGACGCTG AATATGGTGA CAGCGCAGCG CGACCGATCT
GCCCGACCGT TCGTGCTGGC GGTCGATGTT CCCACCGGCG TCCATGCCGA TAGCGGTGCG
TTGCTCGGCA ATGCGGTGTG CGCCGATCTG ACCGTTTCGA CCGGTCCGCT CAAACGCGGG
TTGGTCTTCT ACCCGGCGCG CGCGTATGCT GGCGAACTGT GCAGCGTCGA TATCGGTCTT
TCGCCAGCCG ACCTGGAGGG CATTATGACC GAATTAATCG ACGGGGACCT GGCGCGTTCG
CTCTTGCCGC CACGCCCGCC GGATTCGCAC AAGGGTACGT TTGGCAAAGC GCTCGTGGTG
GCTGGATCGG TGCATTATCC CGGCGCAGCG TCTCTGGCGA GCGCTGGCGC CGCGCGCGTT
GGCGCCGGCC TGGTGACCCT CGCCGTCGGG CGCAGCCAAC TGGTTGGTCC GGGGCGCATC
CCCGAAGTGA CGCTCCACCC GCTGCCCGAA GCCGAATGGG GCGTGCTCGG CGATGCCGCA
GCCGATGAAA TGCTCGCCAT TCTTGGCGAC TATCAGGCGT TGCTCGTTGG TCCGGGTCTG
GGGCGCGAAA AGGCGACGCG CGCGTTCTTT GAACGGTTGC TCGGCTTGCA ATCGCCGCGC
CATCGTGGGC AGATCGGGTT CCGTATCGCC ACAGCGGGGA GCGAGAAAGC CGCTGTGAAA
CAGCGACCGG AACTGCCGTT CACGGTCATT GATGCCGATG GTCTGAATAT TCTGGCAGAC
CTGATTCATC ATCCTGAACC ATCGAATGCC GCGTTCGGCG CCGTCTGGGA TCGTTTGCCG
ATGGGGAGGT GTGTGCTGAC TCCCCATCCC GGTGAGATGC GTCGTCTGCT CGGCGTCGAA
CAGATCGCTG AGCATCCGGT CGATGTGGCG AAGGACGCCG CCGCGCGCTG GAAGCAGATC
GTGGTGCTCA AGGGCGCAAC GACGGTCATT GCCGACCCGG AGGGGCGGGT GCGCGTGAAT
GATGGCGGCA ACCCGGCACT GGCGACCGCC GGAACCGGTG ATGTGTTGGC GGGCGCCATC
GCGGGGCTGC TGGCGCAGGG GTTGAAGCCG TTCGATGCCG CAACGCTTGG CGTCTACCTC
CATAGCGCTG CCGGTCGCCT GGTGCGCGAC GAACTCGGGG ATATGGGGAC GCTTGCCGGT
GATTTACTGC CGCGTCTGCC GCTGGCAATT CGCGCCCTGA AACAGTCGTG A
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| Protein sequence | MSKIVTAGEM RAIEEAAVAR GATWSGLMEQ AGTGVARVAR EAIGNPAGRC ALVLVGPGNN
GGDGLVAARL LHDAGVKVML YFWRRQETST DGNWRLCRER AISEVRAADD PQSQALRRAL
AESDLVIDAL LGYGANRPVE GELATIIATL NMVTAQRDRS ARPFVLAVDV PTGVHADSGA
LLGNAVCADL TVSTGPLKRG LVFYPARAYA GELCSVDIGL SPADLEGIMT ELIDGDLARS
LLPPRPPDSH KGTFGKALVV AGSVHYPGAA SLASAGAARV GAGLVTLAVG RSQLVGPGRI
PEVTLHPLPE AEWGVLGDAA ADEMLAILGD YQALLVGPGL GREKATRAFF ERLLGLQSPR
HRGQIGFRIA TAGSEKAAVK QRPELPFTVI DADGLNILAD LIHHPEPSNA AFGAVWDRLP
MGRCVLTPHP GEMRRLLGVE QIAEHPVDVA KDAAARWKQI VVLKGATTVI ADPEGRVRVN
DGGNPALATA GTGDVLAGAI AGLLAQGLKP FDAATLGVYL HSAAGRLVRD ELGDMGTLAG
DLLPRLPLAI RALKQS
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