Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1514 |
Symbol | |
ID | 5538990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1935384 |
End bp | 1936169 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893652 |
Product | biotin/lipoate A/B protein ligase |
Protein accession | YP_001431625 |
Protein GI | 156741496 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0095] Lipoate-protein ligase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0104687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAC CACCATCATC GTCCTGGCGC GCCTACGACT GGCAGGTGAT CCAGAGCGCG CCGATGAAGC CGGTTCTGCA CATGGCGCTC GATGAAGCGC TCCTGGAAGC AGTCGCCGCC GGACGTCGCC CGCCGACACT GCGCATCTGG GAGTGGGCTG CCAGCGCCGT CGTGATCGGG CGTTTCCAAT CGCTGCGGAA CGAAGTCGAT CTGGACGGCG CGCAACGCCA CGGAGTGCAG GTCGTTCGGC GGATCACCGG CGGCGGTGCG ATGTTCATCG AACCGGGAAA CACGATCACC TACTCGATCT ACGCGCCGGT CGAACTGGTG GCGGGGATGA GCATGATCGA CTCCTACGCC TTCTTCGACC GCTGGGTGCT CGACGCGCTG GCGTCACTCG GCGTCGAAGC GTGGTACCAA CCGATCAACG ACATCACCTC GGCAGCCGGA AAGATCGGCG GAGCGGCGCA AACGCGGCGG GGCGGCGCGG TGCTTCACCA TGTGACGATG GCATACGACA TCGACAACGC CAAAATGATG GAGGTGTTGC GGATCGGGCG CGAGAAACTC AGTGACAAGG GGATCGCCAG CGCCGCCAAA CGGGTCGATC CGCTGCGTCG CCAGACCGGT TTGCCGCGCG AGGCGATCAT CGAGCGCATG ATCGACACGT TCCGCACGCA GAACGGACTG ACCGAATCCA ACATCACACC GGAGGAGTGG GAGGCGGCTG AGCGCCTGGT CGCAACAAAA TTCGGCACGC AGGAATGGCT GCGCGCCGTG CCATAA
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Protein sequence | MSIPPSSSWR AYDWQVIQSA PMKPVLHMAL DEALLEAVAA GRRPPTLRIW EWAASAVVIG RFQSLRNEVD LDGAQRHGVQ VVRRITGGGA MFIEPGNTIT YSIYAPVELV AGMSMIDSYA FFDRWVLDAL ASLGVEAWYQ PINDITSAAG KIGGAAQTRR GGAVLHHVTM AYDIDNAKMM EVLRIGREKL SDKGIASAAK RVDPLRRQTG LPREAIIERM IDTFRTQNGL TESNITPEEW EAAERLVATK FGTQEWLRAV P
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