Gene Rcas_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1514 
Symbol 
ID5538990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1935384 
End bp1936169 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID640893652 
Productbiotin/lipoate A/B protein ligase 
Protein accessionYP_001431625 
Protein GI156741496 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0104687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAC CACCATCATC GTCCTGGCGC GCCTACGACT GGCAGGTGAT CCAGAGCGCG 
CCGATGAAGC CGGTTCTGCA CATGGCGCTC GATGAAGCGC TCCTGGAAGC AGTCGCCGCC
GGACGTCGCC CGCCGACACT GCGCATCTGG GAGTGGGCTG CCAGCGCCGT CGTGATCGGG
CGTTTCCAAT CGCTGCGGAA CGAAGTCGAT CTGGACGGCG CGCAACGCCA CGGAGTGCAG
GTCGTTCGGC GGATCACCGG CGGCGGTGCG ATGTTCATCG AACCGGGAAA CACGATCACC
TACTCGATCT ACGCGCCGGT CGAACTGGTG GCGGGGATGA GCATGATCGA CTCCTACGCC
TTCTTCGACC GCTGGGTGCT CGACGCGCTG GCGTCACTCG GCGTCGAAGC GTGGTACCAA
CCGATCAACG ACATCACCTC GGCAGCCGGA AAGATCGGCG GAGCGGCGCA AACGCGGCGG
GGCGGCGCGG TGCTTCACCA TGTGACGATG GCATACGACA TCGACAACGC CAAAATGATG
GAGGTGTTGC GGATCGGGCG CGAGAAACTC AGTGACAAGG GGATCGCCAG CGCCGCCAAA
CGGGTCGATC CGCTGCGTCG CCAGACCGGT TTGCCGCGCG AGGCGATCAT CGAGCGCATG
ATCGACACGT TCCGCACGCA GAACGGACTG ACCGAATCCA ACATCACACC GGAGGAGTGG
GAGGCGGCTG AGCGCCTGGT CGCAACAAAA TTCGGCACGC AGGAATGGCT GCGCGCCGTG
CCATAA
 
Protein sequence
MSIPPSSSWR AYDWQVIQSA PMKPVLHMAL DEALLEAVAA GRRPPTLRIW EWAASAVVIG 
RFQSLRNEVD LDGAQRHGVQ VVRRITGGGA MFIEPGNTIT YSIYAPVELV AGMSMIDSYA
FFDRWVLDAL ASLGVEAWYQ PINDITSAAG KIGGAAQTRR GGAVLHHVTM AYDIDNAKMM
EVLRIGREKL SDKGIASAAK RVDPLRRQTG LPREAIIERM IDTFRTQNGL TESNITPEEW
EAAERLVATK FGTQEWLRAV P