| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1513 |
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| Symbol | |
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| ID | 5538989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1934377 |
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| End bp | 1935369 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893651 |
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| Product | ribonuclease III |
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| Protein accession | YP_001431624 |
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| Protein GI | 156741495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.01126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG TTGAATCTGT GGCGCAGGCG CATCCCCGTG ACCAGCGCAC GATTGATGCG
GAGCAACCCA CCTTTTCGAT TGTAGCGCCG GTATATAACG AAGAGGTGTT ATTGCCGGAG
TTTTACCGGC GTGTTGTGGC AGCGATCGAG CCGCTGGGTG AGCCGTTCGA GATTGTGTTG
GTGAACGATG GATCGCGCGA TCGCTCGCTC CAGATCATGC TGGAACTGCA CGAACGCGAT
CCGCGCGTCA AAGTGATCAA CTTTTCACGC AACTTCGGGC ATCAGATTGC GATCACTGCC
GGTACCGACT ACGCGCGCGG CAGGGCAGTC GCTGTGATCG ACTCGGACCT TCAAGATCCG
CCGGAAGTGA TCGTGGACAT GATCGCCCGC TGGCGCGAAG GGTACCAACT CGTTTATGGC
GTGCGATCCG AACGTGAAGG CGAAACGGCT TTCAAACTTG CCACTGCTTC CCTCTTCTAC
CGCCTCATTC GCAAAATTAC CAGCGTCGAT ATTCCTGCCG ACACCGGCGA CTTCCGCTTG
ATGGATCGCA AGGTGGTCGA TGCGCTCAAG TCGATGCGTG AGCATCACCG CTTCATGCGC
GGGTTGTCGG TGTGGGTCGG CTTCAAGCAG ACTGGCGTCA CCTACAAGCG CGACGCGCGC
AAGGCGGGGG TGACGAAATA TCCGCTGCGC AAAATGCTGA AGTTTGCGAT GGACGGTATT
ACCGCATTCT CGTACCTGCC GCTGCAACTG GCAACCTATG TGGGGTTCGG CGTGGCGGCG
CTCGGGTTGC TCGGCATTAT TGCGGTGATC ATTCTGCGTC TGCTCGGCAA TGAGCTTCTG
GGGCAGGCGA CGACGCTGGT GGCGGTGCTG TTCATGGGGG GCGTGCAGCT GGTCTTCCTC
GGCATCCTCG GCGAATACCT GGGTCGCATT TACGATGAAG TCAAGCAGCG CCCCCTCTAT
ATCGTCGCCG ATGCGATCGG GTTCGATGAA TAA
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| Protein sequence | MTFVESVAQA HPRDQRTIDA EQPTFSIVAP VYNEEVLLPE FYRRVVAAIE PLGEPFEIVL
VNDGSRDRSL QIMLELHERD PRVKVINFSR NFGHQIAITA GTDYARGRAV AVIDSDLQDP
PEVIVDMIAR WREGYQLVYG VRSEREGETA FKLATASLFY RLIRKITSVD IPADTGDFRL
MDRKVVDALK SMREHHRFMR GLSVWVGFKQ TGVTYKRDAR KAGVTKYPLR KMLKFAMDGI
TAFSYLPLQL ATYVGFGVAA LGLLGIIAVI ILRLLGNELL GQATTLVAVL FMGGVQLVFL
GILGEYLGRI YDEVKQRPLY IVADAIGFDE
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