| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1494 |
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| Symbol | |
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| ID | 5538969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1910060 |
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| End bp | 1911334 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893632 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001431606 |
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| Protein GI | 156741477 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.457179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACA TTCGCCTGAT ACGTGAGCAA CCCGACATGG TCAAAGCGGC GCTTGGGCGG
GCAGGCGTCG ATCCAGCACA GGTTGACGCT GTGCTGGCAT ACGACGAACA ACGTCGCGCG
CTGCTGCGCG AAGTGGAGAA ACTGAAAGCC TTGCGCAATG CGGTCTCAAA AGAGATCGGC
AAGATGAGCG ACGCGGGCGA ACGCGACACG AAAATCGCCG AAATGCGCGC CGTCGGCGAC
CGCATCGCCG CGCTGGACCG CGAACTCGCT GCGGTGGAAG AGCGGCAGTA CGCTGCGCTA
ATGGAACTGC GCAACCTGCC GCATCCCGCA GTTCCCGACG GACCGGACGA GACCTACAAC
GTGGTGATTG CGCAGGAAGG TGAACCGCGC GCCTTCGATT TTGCGCCAAA GCCACACTGG
GAACTCGGCG AAGCGCTCGA CATCATCGAT TTCGAGCGGG GCGTCAAACT CTCCGGCTCA
CGCTTCTACG TCCTCAAAGG GCTGGGAGCG CGCCTGCAAC GCGCCCTGAT CCAATGGATG
CTCGATCTTC ACATCCAACA GGGATACCAC GAGGTCTATA CACCGTTCGT GGTAAAAGAG
CAATGCATGT GGGGCGCGCG CCAGTTGCCC AAGTTCCGTG ACAACCTCTA CCGCGACGTG
GAGGACGACC TGTGGCTGGT GCCGACCGCC GAGGTGCCGG TCACCAATCT CCACCGCGAC
GAGATTCTCG AGGCGGATCA GTTGCCGCTC CGCTATTGCG CCTACACCCC CTGCTTCCGC
CGCGAAAAGA TGAGCGCCGG GCGCGATGTG CGCGGCATCA AGCGCGGGCA CCAATTCGAC
AAAGTCGAGA TGTACATGTT TGTCCACCCC GACACAAGCT ACGACGAACT CGAGAAACTA
CGCGCCGACG CCGAAGCAAC CTGTCGTCTG CTGGGATTGA CCTTCCGCAC CAAAGAACTC
TGCACCGGCG ACCTCGGATT TGCCGCCACG CGCACCTACG ATATCGAGGT GTGGGCGCCG
GGGCAGGGCG AATGGCTCGA AGTCAGCTCC TGCTCGAATG TCGAAGCCTT TCAGGCGCGG
GCAGCGAACA TTCGCTACCG TTCAGCGCCG GGGGCGCGTC CAGAGTATGT CCATACCCTG
AACGGCTCAG GGTTGGGGCT GCCGCGCACG CTGATAGCCA TTATGGAGAA CTACCAGCAG
GCTGATGGCA GCATCATCAT TCCTGACGTT CTGCGTCCGT ATATGGGGGG GGCTGAGGTT
ATTCGACGGT CATAA
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| Protein sequence | MLDIRLIREQ PDMVKAALGR AGVDPAQVDA VLAYDEQRRA LLREVEKLKA LRNAVSKEIG
KMSDAGERDT KIAEMRAVGD RIAALDRELA AVEERQYAAL MELRNLPHPA VPDGPDETYN
VVIAQEGEPR AFDFAPKPHW ELGEALDIID FERGVKLSGS RFYVLKGLGA RLQRALIQWM
LDLHIQQGYH EVYTPFVVKE QCMWGARQLP KFRDNLYRDV EDDLWLVPTA EVPVTNLHRD
EILEADQLPL RYCAYTPCFR REKMSAGRDV RGIKRGHQFD KVEMYMFVHP DTSYDELEKL
RADAEATCRL LGLTFRTKEL CTGDLGFAAT RTYDIEVWAP GQGEWLEVSS CSNVEAFQAR
AANIRYRSAP GARPEYVHTL NGSGLGLPRT LIAIMENYQQ ADGSIIIPDV LRPYMGGAEV
IRRS
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