| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1492 |
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| Symbol | |
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| ID | 5538967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1907036 |
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| End bp | 1908307 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893630 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_001431604 |
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| Protein GI | 156741475 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.447881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACAGG AAAGGCTCTC TGCTATGAGC GTCGGGCAGC GTGTGGTGAT TACCGGTCTG
GGCGCCGTGA CGCCATGTGG GAACACGGTC CCGTTGTTGT GGGAAGCACT TCTTGCCGGT
CGTAGCGGAA TCGGTCCGAT CACTCGCTTC GATGCCTCTG GTTTTGTCAT TCGGATTGCC
GGCGAGGTGC GCGGTTTTGC GCTCGATCCC GCTGTTGATG CGCGTGAAGC GCGCCGAATG
CCGTTGTATG TGCGGTATGC GCTCAATGCT GTTCTCGAGG CAGTGCGCGA CGCGCGTCTC
GATATGGCGC GCGAAGACCC GGAACAGGTG GGAGTGGTCT TTGGCAGCGG CGCTGGCGGA
CTTGATCTGA TCTTCGATAA CCACGACGTT CTGCGCGAAC GTGGTCCCCG GCGGGTCTCT
CCAACCCTGA TCGCCAATAT GATTCCGGAC TCGGCCAGCG GCTATATTGC GATCCAGTTG
GGTGCGCAGG GTCCGAACAT GGCGGTTGTG GCAGCGTGCT CTACCGGCGG GCACAATGTC
GGTGAAGCGT ATGAACTGAT CCGCCGGGGT GATGCCGCTG TGGTGATCGC CGGCGGGAGT
GAGGCGCCGA TCCATCCAAC GATTGTGGCG TCGTTCTCGA ATATGCGTGG ACTGGCGGAA
GATAACCTCA ACCCCGAACG CGCTTGTAAG CCGTTCGACG CTCGTCGCGA CGGGTTTATT
CTTTCGGAGG GTGCGGGAGC GCTGGTGCTG GAAAGCCTCG ATCATGCGCT GGCGCGCGGC
GCGCCGATTG TGGCGGAGAT TGTCGGTTAT GGCAATAGTT GCGATGCGGG CGATATGATC
GCTGCCGATG ATCAGGGGCG TGGCGCGGCG CGCGCGATGG CGACGGCGTT GCGCAAATCC
GGTCTGCCGC CGGAGGCGGT GGACTATATT AATGCCCACG GCACCGGCAC GCCGCTCAAC
GATCTTGCCG AAACGCGCGC GATCAAGGCG GTGTTCGGCG ATCATGCGTA TCGCGTGGCG
ATCAGTTCCA CCAAATCGAT GCTGGGCCAT ATGATGGGCG CGGCCGGCGC CGTCGAGGCG
TTGATCTGTG CGCTTGTCAT CCGCGATGGG CGCATCCCGC CAACGATCAA CCTCGACGAG
CCGGACCCCG ACTGTGACCT GGATTATGTG CCGAATACCG CGCGCACGGC TGAGGTGCGC
GCGGCGCTGT CGAACTCGAT CGGGTTGGGC GGGCACAACT CAGCATTGAT CATGCGGCGA
TTCGAAGGAT GA
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| Protein sequence | MGQERLSAMS VGQRVVITGL GAVTPCGNTV PLLWEALLAG RSGIGPITRF DASGFVIRIA
GEVRGFALDP AVDAREARRM PLYVRYALNA VLEAVRDARL DMAREDPEQV GVVFGSGAGG
LDLIFDNHDV LRERGPRRVS PTLIANMIPD SASGYIAIQL GAQGPNMAVV AACSTGGHNV
GEAYELIRRG DAAVVIAGGS EAPIHPTIVA SFSNMRGLAE DNLNPERACK PFDARRDGFI
LSEGAGALVL ESLDHALARG APIVAEIVGY GNSCDAGDMI AADDQGRGAA RAMATALRKS
GLPPEAVDYI NAHGTGTPLN DLAETRAIKA VFGDHAYRVA ISSTKSMLGH MMGAAGAVEA
LICALVIRDG RIPPTINLDE PDPDCDLDYV PNTARTAEVR AALSNSIGLG GHNSALIMRR
FEG
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